Gene RPB_0693 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0693 
Symbol 
ID3908199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp779249 
End bp780298 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content64% 
IMG OID637882585 
Productinner-membrane translocator 
Protein accessionYP_484315 
Protein GI86747819 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0559] Branched-chain amino acid ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGGCA CGATGGCGCT GATTTTGGCG CAGGACGGAC TCACGACCGG CATCATCTAC 
GCCTTGCTGT CGTTGTCCAT CCTGCTCGTG TTTCTCGTCA CGCGCATCCT ATGGGTGCCC
GCCGGGGAGT TCGTCACCAT GGGTGCGCTG ACGATGGGGA TCTTGCAGAA GAACGAAGCG
CCCGCGACGG TGTGGCTGCT CGCAGCCCTG GGCGCGGTCA CGCTGCTGCG TGAGGCGATT
CGCTCGTTCA GAACGGGTCA GTGGAGCGGC TGGTGGCCCA CCGTCGCGTT TTGCGCCGGG
ATTCCGGCCG TGGTCGTCGT CGCGACGCTG AAGCTGGCGC CGATGGGGCT GCCGATCTTT
GCCCAGGTGC TCCTCACTCT GGCGATCACG GTGCCGATGG CGCCGATGAT CTATCGAAGC
GCGTTCATGG ATCTCGCCGG CTCATCGGTG CTCGTCCTGC TCTTCGTCGC CGTCGCCGTG
CACTATCTGT TGACGGGCCT CGGCCTCGTC TTCTTCGGAC CCGACGGAAT GCGCACCGCG
CCGTTCATTC CGGGCCGGCT GGATATCGGC TTCACGCGTA TTTCCTGGCA CCTGCTGCTG
GTCGTCGCGG TCGCCCTGTC GCTCACAGCG ATCCTGTTCG CATTCTTCGA GCGGACGTTC
TGGGGGAAAT CCATGCGGGC GGTGGCCGTC AACCGGAAGG GCGCCCGGCT GGTCGGGATC
AAGCCGGAAA CGGCGGGAAC GATCGCGTTC AGCATCGCCG GCCTGATTGG ATGCCTGTCG
GGAATCCTGA TCGCGCCGGT CACCGGGATT TACTACGACA GCGGGTTCCT GATCGGACTG
AGAGGCTTCG TCGGCGCGGT GCTGGGTGGG CTCGCGAGTT TTCCGACCGC GATCGTAGGC
TCGATATTCG TCGGCCTGTT CGAGAGCTAC GCATCCTTCT TCGCATCGGC TTACAAGGAA
GCCATCGTAT TTTCTCTTCT GGTTCCGATC CTGATCTGGC GTTCCGTCGT CGAACGGCGC
CGGAGCGGAT TGTCGGACGA CGCGGAGTGA
 
Protein sequence
MNGTMALILA QDGLTTGIIY ALLSLSILLV FLVTRILWVP AGEFVTMGAL TMGILQKNEA 
PATVWLLAAL GAVTLLREAI RSFRTGQWSG WWPTVAFCAG IPAVVVVATL KLAPMGLPIF
AQVLLTLAIT VPMAPMIYRS AFMDLAGSSV LVLLFVAVAV HYLLTGLGLV FFGPDGMRTA
PFIPGRLDIG FTRISWHLLL VVAVALSLTA ILFAFFERTF WGKSMRAVAV NRKGARLVGI
KPETAGTIAF SIAGLIGCLS GILIAPVTGI YYDSGFLIGL RGFVGAVLGG LASFPTAIVG
SIFVGLFESY ASFFASAYKE AIVFSLLVPI LIWRSVVERR RSGLSDDAE