Gene RPB_0692 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0692 
Symbol 
ID3908198 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp778048 
End bp779187 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content62% 
IMG OID637882584 
Productextracellular ligand-binding receptor 
Protein accessionYP_484314 
Protein GI86747818 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGAAGT ATGCGATTCT CGTTGCGGCT TGTCTGGTCA TCGGTGGTGG CGGTCAGTCG 
AGCGCCCAGG AGATCAAGGT CGGTCTCACC GCCGATTTCA CCGGCGCGAC GGCGGCAGTC
GGCGCCCCGT TCAAGCTCGC CGCCGAAATT TTCCCCGATC ATCTGGGCGG ACTGCCGGTC
AAATGGATCG TGCTCGATGA CGCGGGCAAT ACCTCGACGA CGGTGAAGAA TGCCCGCAAA
TTCGTCGACG AGGACAAGGT CGACATCATC CTCGGCTCCA ACACGATCCC GTCGACCGTC
GCGATGTTCG GCATCGCGGC TCAGAGCGCA ACGCCGCAAA TCGCACTCGT TCCCGTCGAC
ATCCCGACCG AGCAGCGGGC CTGGCTTTTC AATCTTCCGC AGTCGGCGCG GATCATGGTC
GGCGCCATCG TCGACGATAT GAAATCGCGT AACTTCAAGC GGGTCGCGTT CATCGGCTAC
AATGACGGCT GGGGCGAACT CAACTGGAAG AATTTCGAGC AGTTGGCGAA TGCCGGCGGC
CTGCAGATCG TCGCCAAGGA ACTCTACAGC CGCAATGATA CGTCAGTCAC CGCGCAAGTG
CTCAAGCTGC TCGAAGCCAA GCCCGACGCG GTGTTCGTCG GAGCCTCCGC TACGCCGGCG
ACACTTCCGC ATCTGACGCT GAAGGACCAG GGCTTCAAGG GACAGATCTA CCACACGCAT
GGCGCGGTTT CGAAACCGTT CCTGAACGCC GGCGGCAAGG AACTCGAGGG CGCTATTCTG
CCGACCGGGC CGATCGTCGT TGCCGCCAGT CTTCCCGACA GCAATCCGAT CAAGAAGGTC
GGACTCGATT TCTCCGCGAA ATACGCGGCC AAGTATGGTC CGGGCGCGCC CAATCCGTTC
GCTGGATACG CATGGGATGC GATGCTCCTC CTCGAGGCGG CCGTCCCCGA TGCGGCGGCG
AAGGCGAAGC CGGGTACTCC CGAATTCCGA TCGGCCCTGC GAGACTCGCT GGCGTCCGGC
CGCGAAGTGG TCGGCACCCA CGCGGTCTAC AAATTCACGG ACCAGGATCG CTACGGCGTC
GACGATCGAT CGCGCGTGCT GGTGATCGTC AAGAACGGCG CTTTCGCTCT GTACAAATAG
 
Protein sequence
MVKYAILVAA CLVIGGGGQS SAQEIKVGLT ADFTGATAAV GAPFKLAAEI FPDHLGGLPV 
KWIVLDDAGN TSTTVKNARK FVDEDKVDII LGSNTIPSTV AMFGIAAQSA TPQIALVPVD
IPTEQRAWLF NLPQSARIMV GAIVDDMKSR NFKRVAFIGY NDGWGELNWK NFEQLANAGG
LQIVAKELYS RNDTSVTAQV LKLLEAKPDA VFVGASATPA TLPHLTLKDQ GFKGQIYHTH
GAVSKPFLNA GGKELEGAIL PTGPIVVAAS LPDSNPIKKV GLDFSAKYAA KYGPGAPNPF
AGYAWDAMLL LEAAVPDAAA KAKPGTPEFR SALRDSLASG REVVGTHAVY KFTDQDRYGV
DDRSRVLVIV KNGAFALYK