Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0692 |
Symbol | |
ID | 3908198 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 778048 |
End bp | 779187 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637882584 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_484314 |
Protein GI | 86747818 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGAAGT ATGCGATTCT CGTTGCGGCT TGTCTGGTCA TCGGTGGTGG CGGTCAGTCG AGCGCCCAGG AGATCAAGGT CGGTCTCACC GCCGATTTCA CCGGCGCGAC GGCGGCAGTC GGCGCCCCGT TCAAGCTCGC CGCCGAAATT TTCCCCGATC ATCTGGGCGG ACTGCCGGTC AAATGGATCG TGCTCGATGA CGCGGGCAAT ACCTCGACGA CGGTGAAGAA TGCCCGCAAA TTCGTCGACG AGGACAAGGT CGACATCATC CTCGGCTCCA ACACGATCCC GTCGACCGTC GCGATGTTCG GCATCGCGGC TCAGAGCGCA ACGCCGCAAA TCGCACTCGT TCCCGTCGAC ATCCCGACCG AGCAGCGGGC CTGGCTTTTC AATCTTCCGC AGTCGGCGCG GATCATGGTC GGCGCCATCG TCGACGATAT GAAATCGCGT AACTTCAAGC GGGTCGCGTT CATCGGCTAC AATGACGGCT GGGGCGAACT CAACTGGAAG AATTTCGAGC AGTTGGCGAA TGCCGGCGGC CTGCAGATCG TCGCCAAGGA ACTCTACAGC CGCAATGATA CGTCAGTCAC CGCGCAAGTG CTCAAGCTGC TCGAAGCCAA GCCCGACGCG GTGTTCGTCG GAGCCTCCGC TACGCCGGCG ACACTTCCGC ATCTGACGCT GAAGGACCAG GGCTTCAAGG GACAGATCTA CCACACGCAT GGCGCGGTTT CGAAACCGTT CCTGAACGCC GGCGGCAAGG AACTCGAGGG CGCTATTCTG CCGACCGGGC CGATCGTCGT TGCCGCCAGT CTTCCCGACA GCAATCCGAT CAAGAAGGTC GGACTCGATT TCTCCGCGAA ATACGCGGCC AAGTATGGTC CGGGCGCGCC CAATCCGTTC GCTGGATACG CATGGGATGC GATGCTCCTC CTCGAGGCGG CCGTCCCCGA TGCGGCGGCG AAGGCGAAGC CGGGTACTCC CGAATTCCGA TCGGCCCTGC GAGACTCGCT GGCGTCCGGC CGCGAAGTGG TCGGCACCCA CGCGGTCTAC AAATTCACGG ACCAGGATCG CTACGGCGTC GACGATCGAT CGCGCGTGCT GGTGATCGTC AAGAACGGCG CTTTCGCTCT GTACAAATAG
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Protein sequence | MVKYAILVAA CLVIGGGGQS SAQEIKVGLT ADFTGATAAV GAPFKLAAEI FPDHLGGLPV KWIVLDDAGN TSTTVKNARK FVDEDKVDII LGSNTIPSTV AMFGIAAQSA TPQIALVPVD IPTEQRAWLF NLPQSARIMV GAIVDDMKSR NFKRVAFIGY NDGWGELNWK NFEQLANAGG LQIVAKELYS RNDTSVTAQV LKLLEAKPDA VFVGASATPA TLPHLTLKDQ GFKGQIYHTH GAVSKPFLNA GGKELEGAIL PTGPIVVAAS LPDSNPIKKV GLDFSAKYAA KYGPGAPNPF AGYAWDAMLL LEAAVPDAAA KAKPGTPEFR SALRDSLASG REVVGTHAVY KFTDQDRYGV DDRSRVLVIV KNGAFALYK
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