| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0676 |
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| Symbol | |
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| ID | 3908603 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 760634 |
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| End bp | 761803 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637882567 |
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| Product | succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_484298 |
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| Protein GI | 86747802 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01246] succinyl-diaminopimelate desuccinylase, proteobacterial clade |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGCGA CCGCGCTCGA GATCGCGCAG GCGCTGCTGC GCTGTCCGTC GGTGACGCCG
GCCGATGCCG GCGCGCTCGG CGTGCTGGAG GCGCTGCTGC AGGACGCGGG CTTCGCGACG
CATCGGGTGA CTTTCAGCGA GCCCGGCACC GCCGACATCG ACAATCTCTA CGCGCGGATC
GGTGACGGTG CGCCGCATCT CTGCTTCGCC GGCCACACCG ACGTGGTGCC GCCCGGCGAA
GAAACCGCAT GGAGCCATGG CGCGTTCGCA GGCGATGTCG AAGGCGGCCT GCTGTACGGC
CGCGGCGCGG TCGACATGAA GGGCGGCATC GCCTGCGCGG TGGCGGCGAC GCTGGATTAT
CTGGCCGCGA ATGGCGGCCA GCCGCAACAA TCCGGCAAAG GCTCGATCTC GTTCCTGATC
ACCGGCGACG AGGAAGACGT CGCCGTCAAC GGCACCGTCA AGCTGCTGCA ATGGGCCGCC
GAACGCGGCG AGCGCTTCGA TCACTGCATC GTCGGCGAGC CGAGCAATGT CGAGGCGATC
GGCGACACCA TCAAGATCGG TCGGCGCGGC TCGCAGTCCG GCGTGCTGAT CGTCGACGGC
CGGCAGGGCC ATGTCGCCTA TCCGCACCGC GCATCGAATC CGATCCCCGA TATCGCAACG
TTGATCACCG CGCTGAACGA CGAGCCGCTG GATCAAGGCT CGGCGCAATT CCAGCCGTCG
AACCTCGAAT TCACCTCGGT CGACGTCGGC AATCCGGCCA CCAATGTGAT CCCGGCGCAG
GCCCGCGCCA AGTTCAACAT CCGCTTCAAC GATCACCACA CCCAGGAGAC GCTGCGCGCG
CTGGTCGAGC AGCGGCTCGC CGCCGCCTGC GGCAACCGCA TCCGCGCCCG AATCGAATGG
CTGCCGTCGA ACGCCGATGT GTTCGTGACG AAGCCCGGCG GCTTCACCGA TCTGGTGTCG
GCCGCGATCG CCGACATCAC CGGCCGCAGC CCCGACCTCA ACACCGGCGG CGGCACCTCG
GATGCGCGCT TCATCGCCAA ATACTGTCCG GTGGTCGAGT TCGGCCTGGT CGGCCAGACC
ATGCACCAGA TCGACGAACG CACGCCCGTG AGCGATCTCG ACAAGCTCAC CGCGATCTAT
CGCGGCGTGC TGGAGAGATA CTTCAGGTAA
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| Protein sequence | MTATALEIAQ ALLRCPSVTP ADAGALGVLE ALLQDAGFAT HRVTFSEPGT ADIDNLYARI
GDGAPHLCFA GHTDVVPPGE ETAWSHGAFA GDVEGGLLYG RGAVDMKGGI ACAVAATLDY
LAANGGQPQQ SGKGSISFLI TGDEEDVAVN GTVKLLQWAA ERGERFDHCI VGEPSNVEAI
GDTIKIGRRG SQSGVLIVDG RQGHVAYPHR ASNPIPDIAT LITALNDEPL DQGSAQFQPS
NLEFTSVDVG NPATNVIPAQ ARAKFNIRFN DHHTQETLRA LVEQRLAAAC GNRIRARIEW
LPSNADVFVT KPGGFTDLVS AAIADITGRS PDLNTGGGTS DARFIAKYCP VVEFGLVGQT
MHQIDERTPV SDLDKLTAIY RGVLERYFR
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