Gene RPB_0674 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0674 
Symbolfmt 
ID3908601 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp758423 
End bp759361 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content70% 
IMG OID637882565 
Productmethionyl-tRNA formyltransferase 
Protein accessionYP_484296 
Protein GI86747800 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0223] Methionyl-tRNA formyltransferase 
TIGRFAM ID[TIGR00460] methionyl-tRNA formyltransferase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCTTC GCCTCGTTTT CATGGGCACG CCCGATTTCG CGGTGCCGAC GCTGCTGGCG 
CTGTCGGCCT ATGGGCACGA CATCGCGGCG GTCTATAGCC GCGAGCCGAA GCCGGCCGGG
CGCGGCATGA AACTGCAGCA CAGCCCGGTG GCGCAGGAGG CGCAGCGGCT CGGGATTCCC
GTGCTGACGC CGAAGACGCT GAGAACCGAC GAGGCGTTGG CCGAATTCCG CAGCCACGAG
GCCGACGCGG CGGTGGTGGT CGCCTACGGC ATGATCCTGC CGCAGGCGAT CCTCGATGCA
CCAAAGCTCG GCTGCTACAA TCTGCACGGC TCGCTGCTGC CGCGCTGGCG CGGCGCCGCG
CCGCTCAACC GCGCCATCAT GGCGGGCGAC GCCGAATCGG GCGTGATGGT GATGAAGATG
GACGTCGGCC TCGACACCGG CGACGTCGCG ATGGCCGAGC GGATCGCCAT CACCGATGCG
ATGACCGTCA CCGATCTGCA CGACGCGCTG GCACGGCTCG GCGCCGACCT GATGGTGCGG
GCGATGGCGG CGCTGGAGCG CGGCGGGCTG CAGCTCGCCC GGCAGAGCGA ACACGGCGTC
AGCTACGCGG CCAAGATCGA CAAGGCGGAA GCGAAGATCG ATTTCGCCCG GCCGGCGCAG
GCGGTGCTGC GCCACATTCA CGGGCTGTCG CCGTTTCCCG GCGCGTGGTG CGAACTGCCG
ATCGACGGCG AGGCGGTGCG GGTCAAGATC CTGCGCTGCG CGCTCGCCGA TGGTCGCGGC
GCTCCGGGCG AGATGCTGGG CGACGATCTC ACCATCGCCT GCGCCGACGG CGCGATCCGC
GTGCTGCAAT TGCAGCGCGC CGGCAAGCAG CCGATGAGCG CCGACGAGTT CCTGCGCGGC
ACGCCGATCG CGAAGGGCGT GCGGGTGAGT TCAAGCTGA
 
Protein sequence
MPLRLVFMGT PDFAVPTLLA LSAYGHDIAA VYSREPKPAG RGMKLQHSPV AQEAQRLGIP 
VLTPKTLRTD EALAEFRSHE ADAAVVVAYG MILPQAILDA PKLGCYNLHG SLLPRWRGAA
PLNRAIMAGD AESGVMVMKM DVGLDTGDVA MAERIAITDA MTVTDLHDAL ARLGADLMVR
AMAALERGGL QLARQSEHGV SYAAKIDKAE AKIDFARPAQ AVLRHIHGLS PFPGAWCELP
IDGEAVRVKI LRCALADGRG APGEMLGDDL TIACADGAIR VLQLQRAGKQ PMSADEFLRG
TPIAKGVRVS SS