Gene RPB_0658 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0658 
Symbol 
ID3908584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp742518 
End bp743249 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content66% 
IMG OID637882548 
Producthypothetical protein 
Protein accessionYP_484280 
Protein GI86747784 
COG category[S] Function unknown 
COG ID[COG5375] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.27994 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGGTGC GCTTCGCGGC AGCGGCGCGC CATAGCCGGC TGGTGCGGAC GCTGCGGATC 
GCTGTGCCGC TGGTGGTGGC GCTGTCGATG GCCGCGATCA TTGCGATCTC GCTGTTCAAC
CCGTTTCGCC TGCTGTCGAA ACTACCGCTC GAGGTCGGCG ATCTGGTGGT GTCGGGAACC
AAGATTACAA TGGAATCGCC GCATATGGCC GGCTTCACCG ACGACGGCCG GCCCTACGAG
ATGTGGGCGC GGTCGGCGAC GCAGGATCTG ACCAGCCAGG ACCATGTCGA CCTGCATACG
CTGCGGGCCA AGGTCGTCAG CGACGATCAA TCCACCGTGC TGATCGAGGC GCGCGACGGC
AAATTCAACA CCAAGGCGCA ACTCCTGAAT CTGCAGAAGG ACGTCTATCT GCGCACCTCG
ACCGGCAGCG AGGCCTGGAT GACCCAGGCC GACATCGACA TGAGCAAGGG CACCGTGGCG
TCCGACGAGC CGGTCGACGT CAAATGGCTC GGCGGCACGT TGCGCGGCCA GCGGCTGCGG
ATTACCGAGA AAGGCGACGT GATCCGATTC GAGGGCGGAG TGGTGATGAA CCTGGACAAC
ACCGCCATGC CGGCATCTGC CGAGGCGGCC GCGGCGCAGC CGACGCCGGC CTCGGCGCCG
AAGGCCGATC CGGCGGCGAA AGCCAAACCA TCGCCGGCCA CCCCGCGCCA GCGCGACGCG
AATCGCCCAT GA
 
Protein sequence
MEVRFAAAAR HSRLVRTLRI AVPLVVALSM AAIIAISLFN PFRLLSKLPL EVGDLVVSGT 
KITMESPHMA GFTDDGRPYE MWARSATQDL TSQDHVDLHT LRAKVVSDDQ STVLIEARDG
KFNTKAQLLN LQKDVYLRTS TGSEAWMTQA DIDMSKGTVA SDEPVDVKWL GGTLRGQRLR
ITEKGDVIRF EGGVVMNLDN TAMPASAEAA AAQPTPASAP KADPAAKAKP SPATPRQRDA
NRP