| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0654 |
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| Symbol | |
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| ID | 3908579 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 738368 |
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| End bp | 738976 |
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| Gene Length | 609 bp |
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| Protein Length | 202 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637882544 |
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| Product | sigma 54 modulation protein/ribosomal protein S30EA |
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| Protein accession | YP_484276 |
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| Protein GI | 86747780 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1544] Ribosome-associated protein Y (PSrp-1) |
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| TIGRFAM ID | [TIGR00741] ribosomal subunit interface protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0543899 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTTTTC GGGTCTCCGG CAAAAGCATC AGCGTCGGCG AAGCCCTGCG CGGCCGCGTC
AGCGAGCGCA CCGAAGAAGT GCTGCGCAAG TATTTCGACG GCAATTATTC GGGCCACATC
ACGCTGAGCA AGGACGGCTT CGGCTTCCGC ACCGACTGCT CGCTGCATCT CGATTCCGGC
ATCACGCTGG AAGCCGAATC GAACGCCGCC GATGCCTATG CGAGCGCCGA TCAGGCGCTG
CTGCAGATCG AGAAGCGACT GCGTCGCTAC AAGAGCCGGC TGAAGGATCG ATCCGCGCGC
AAGGCGCATG CGGAGGCCAG CGCGCTGGCC GAACTGACCG CGCCGGTGGA CATGCCGAGC
TACATCATCG AAGCGCCCGG CGACGAGGAA CATCACGAGG ACGCCTACAA CCCGGTGATC
ATCGCCGAGG CCACCACCGC GATGAAGCGG TTCTCGGTGA GCGAAGCCGT GGTCGAACTC
GACCTCACCG GCGCCCCGGT GCTGGTGTTC CTTCATGGCA GTTCGGGACG GGTCAACATC
ATCTACCGGC GCGCCGACGG CAACATCGGC TGGATCGATC CGCCGGCGCT GAACGGCGCC
GCGGCCTGA
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| Protein sequence | MTFRVSGKSI SVGEALRGRV SERTEEVLRK YFDGNYSGHI TLSKDGFGFR TDCSLHLDSG
ITLEAESNAA DAYASADQAL LQIEKRLRRY KSRLKDRSAR KAHAEASALA ELTAPVDMPS
YIIEAPGDEE HHEDAYNPVI IAEATTAMKR FSVSEAVVEL DLTGAPVLVF LHGSSGRVNI
IYRRADGNIG WIDPPALNGA AA
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