| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0648 |
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| Symbol | |
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| ID | 3908573 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 733757 |
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| End bp | 734638 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637882538 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_484270 |
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| Protein GI | 86747774 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.184937 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAAGA ACGCCGTCTT TCAATCCAAA TTCCTGCCCT ATTGGCTGGT GCTGCCGCAG
CTCGCGGTGG TGCTGGTGTT CTTCTATTGG CCGGCGCTGC AGGCAGTGGC GCAGTCGTTC
CTGCTGCAGG ATGCGTTCGG GCTGTCGACC ACTTTCGTCT GGTTCGAGAA TTACCAGGAG
CTGCTGGCCG ACCCGGACTA CTTCAGCGCC ATCCTGCGCA CCTTCGTGTT TTCGGTCCTG
ATCGCGGTGT CGTCGCTGTC GCTGGCGCTG CTGCTGGCGG TGATGGCCGA CCGGCCGCTG
CGCGGCTCGA TGTTCTATCG CACCCTGCTG ATCTGGCCCT ACGCGGTGGC GCCGCCGGTG
GTCGGCGTGC TGTGGATCTT CATGCTCAAC CCCTCGCTCG GCGTGATCGC CCACGGCCTG
CGCGCGATCG GCGTCGACTG GAACCCGCTG CTCGACGGCA ACCAGGCCGC GACGCTGATC
ATCCTCGCCG CGGCGTGGAA GCAGATCTCC TACAATTTCC TGTTCTTCCT CGCCGGGCTG
CAGGCGATCC CGGGAAGCGT CATCGAGGCG GCGGCGATCG ACGGCGCGCG GCCGATGCGG
CGGTTCTGGA CCATCGTGTT CCCGCTGCTG TCGCCGACGA TCTTCTTCCT GATCGTCGTC
AACATCGTCT ACGCCTTCTT CGAAACCTTC GGCATCATCG ACACCATGAC CCGCGGCGGC
CCGGCCAAGG CCACCGAGAC GCTGGTCTAC AAGGTCTACA GCGACGGCCT GCTCGGCGGC
AATCTCGGCA GCTCGGCGGC GCAGTCGGTG ATCCTGATGG GCATCGTCAT CGCGCTCACC
GCGTTCCAGT TCCGCTTCGT CGAACGCAAG GTGAACTACT GA
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| Protein sequence | MLKNAVFQSK FLPYWLVLPQ LAVVLVFFYW PALQAVAQSF LLQDAFGLST TFVWFENYQE
LLADPDYFSA ILRTFVFSVL IAVSSLSLAL LLAVMADRPL RGSMFYRTLL IWPYAVAPPV
VGVLWIFMLN PSLGVIAHGL RAIGVDWNPL LDGNQAATLI ILAAAWKQIS YNFLFFLAGL
QAIPGSVIEA AAIDGARPMR RFWTIVFPLL SPTIFFLIVV NIVYAFFETF GIIDTMTRGG
PAKATETLVY KVYSDGLLGG NLGSSAAQSV ILMGIVIALT AFQFRFVERK VNY
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