Gene RPB_0647 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0647 
Symbol 
ID3908572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp733318 
End bp733734 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content66% 
IMG OID637882537 
Producthypothetical protein 
Protein accessionYP_484269 
Protein GI86747773 
COG category[S] Function unknown 
COG ID[COG2852] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.177117 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCCAGG CACGAACGCT GATGGCACGC ACAGTCGACC AGCGGATCCA ACGAGCCCGG 
AGTTTCCGTC GAAATCCGAC GGACGCCGAG CGCAAGCTGT GGCAGCGCCT GCGTCGACCG
GGCTTTGCCG AGGCCCATTT CCGCCGGCAA GCGACGATCG GCCCATACTT TGCGGACTTT
GCCTGCCATG CCCTCCGACT GGTCATCGAA ATCGACGGAG GCCAGCACGC CGGATCGAAC
TCCGACGTCG TTCGAACGGG CTATCTCGAG GCCGCGGGCT ATCGCGTGCT CAGGTTCTGG
AATAACGATG TTCTGAACAA CATCGACGGC GTCATGCAGA TCATCGTAGA CGCCGTGCGC
GCGGCGCCCC CCACCCCCGA CCCCTCCCCG CCGCAAGAGC GGGGGGAGGG GAGCTGA
 
Protein sequence
MPQARTLMAR TVDQRIQRAR SFRRNPTDAE RKLWQRLRRP GFAEAHFRRQ ATIGPYFADF 
ACHALRLVIE IDGGQHAGSN SDVVRTGYLE AAGYRVLRFW NNDVLNNIDG VMQIIVDAVR
AAPPTPDPSP PQERGEGS