| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0642 |
|---|
| Symbol | |
|---|
| ID | 3908335 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | + |
|---|
| Start bp | 727298 |
|---|
| End bp | 727972 |
|---|
| Gene Length | 675 bp |
|---|
| Protein Length | 224 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637882531 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_484264 |
|---|
| Protein GI | 86747768 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2121] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.115344 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCACTC CTGCTTTCGT CAAACGCATC CTGAGGAGCG ACGCTTTCCA GTGGGCGGCG
GTGATTCCGG CCGCGGCCTA TTTGCAGCTC GTGATGTGGA CCGGCCGGTT CGACCGTGCG
CCGTTTCCGA TTGCCGAGCC GTACATCCTG GCGATGTGGC ACGGCCGGCT GAACATGCTG
CCGATGCTGC GCAATGGCGG CAAGCCGATG ATCGCGCTGA TCAGCGGTCA TCGCGACGGC
CAGATCATCA GCAAGGCCGG CGCCGTGTAC GGGATCCAGA CCGCGGTCGG ATCGAGTTCC
AAGGGCGGCA TGCGGGCGGC GCGCGAGATG CTGCGGCTGG CGCGTGACGG CCACAGCCTG
TTCGTGACGC CCGACGGCCC GCGCGGTCCG CGCATGCACA TCAACAATGA CGGCATCCTG
GACCTCGCCC GGCTCACCGG GCTGCCGATC CTGCCGGTCG CCGTCAGCAT GCAGCGCGGC
AAGCTGCTGC GGAGCTGGGA CCGGCTGCTG CTGCCGGGCC TGTTCTCGAA GATCGCGATC
CGGTTCGGCG AACCGATCGT CGTCGATGCC GATGCCGATC GCGCCGAGCT CCGTGCCCGG
CTGTCGGCGT CCCTCACCGC CGCGCAGCAG GAGACCGACC GGCTGGTCGG CCGCGTGCCG
GTCGAGCCGG CGTAG
|
|---|
| Protein sequence | MATPAFVKRI LRSDAFQWAA VIPAAAYLQL VMWTGRFDRA PFPIAEPYIL AMWHGRLNML
PMLRNGGKPM IALISGHRDG QIISKAGAVY GIQTAVGSSS KGGMRAAREM LRLARDGHSL
FVTPDGPRGP RMHINNDGIL DLARLTGLPI LPVAVSMQRG KLLRSWDRLL LPGLFSKIAI
RFGEPIVVDA DADRAELRAR LSASLTAAQQ ETDRLVGRVP VEPA
|
|---|
| |