Gene RPB_0641 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0641 
Symbolcmk 
ID3908334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp726487 
End bp727125 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content71% 
IMG OID637882530 
Productcytidylate kinase 
Protein accessionYP_484263 
Protein GI86747767 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0283] Cytidylate kinase 
TIGRFAM ID[TIGR00017] cytidylate kinase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.112665 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCATCG CCATCGACGG ACCGGCCGCC TCCGGCAAGG GCACGCTCGG CAAGCGGCTC 
GCCGCGCATT ACGGCTTCCG GCACCTGGAC ACCGGCGTGA TCTACCGGGC GGTCGCCAAG
GCGCTGCTTG ATGGCGGCGC CGACCTGACC GACCAGGCGC AGGCCATCGC CGCCGCGCAG
GGGCTCGATC CCGGCCTGTT CGGCGATCCG GCGCTGAAGA GCCAGACCGT CGGCGACGCC
GCCTCGGTGA TTTCGGCCTA TCCGAAGGTC CGCGAGGTGC TGGTCGGCTT CCAGCGGCAA
TTCGCCGCCG AACCGCCGGG TGCCGTGCTC GACGGCCGCG ACATCGGAAC CGTGATCTGC
CCGGACGCCG ACGTGAAAAT CTTCGTCGTC GCCGATCCCG GGGTCCGCGC GCGCCGCCGG
GCGCTCGAGG CGCAGGCGCG CGGCGAGCCG GCGGATGAGG CGGTGATCCT GGCCGACATC
CTGCGGCGCG ACGAACGCGA CAAGGGCCGC AGCGCCGCCC CGCTGAAACA AGCGCCGGAT
GCAGTCTTGC TCGATAATTC CAATTTGGAT ATAGAAGGCG GCGTCCGGGC CGCCATCGCT
ATTGTCGAGG CCGTTCGAGC GGGCCGGCGT CGGGTCTGA
 
Protein sequence
MIIAIDGPAA SGKGTLGKRL AAHYGFRHLD TGVIYRAVAK ALLDGGADLT DQAQAIAAAQ 
GLDPGLFGDP ALKSQTVGDA ASVISAYPKV REVLVGFQRQ FAAEPPGAVL DGRDIGTVIC
PDADVKIFVV ADPGVRARRR ALEAQARGEP ADEAVILADI LRRDERDKGR SAAPLKQAPD
AVLLDNSNLD IEGGVRAAIA IVEAVRAGRR RV