| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0639 |
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| Symbol | |
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| ID | 3908332 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 723235 |
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| End bp | 724200 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637882528 |
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| Product | signal peptide peptidase SppA, 36K type |
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| Protein accession | YP_484261 |
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| Protein GI | 86747765 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0663368 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCTTG ATTCCGATGT GATCGTCGAT CGCCGCCGCA TTCGTCGCAA GCTGACGTTC
TGGCGGGTCG CCGCGGTTCT GGTCGCGATC GGCGCCGTGA TCGCGGTCGG CGCGATGGTG
TCGCCGGCGG GCCCCGCGCT CACGACCTCC GGTTCGATCG CGCGGATCAA GATCGACGGA
CTGATCCGCA GCAACTCCGA ACGGGTCGAG GCGCTGGAGC GGCTGGAGAA GTCGAACAGC
GCCGCGGTGA TCGTCCACAT CAATTCGCCG GGCGGCACCA CCGCCGGCTC GGAAGAACTC
TACACCGCGC TGATGCGGCT GAAGGCCAAG AAGCCGATGG TGGTCGTGGT CGAAGGCCTG
GCGGCGTCGG GCGGCTACAT CGCCGCGCTC GCCTCCGATC ACATCATCGC CCAGCAGAGT
TCGCTGGTCG GCTCGATCGG CGTGCTGTTT CAGTATCCGA ACGTCTCCGA ACTGATGAAG
ACGGTCGGCG TCAAGGTCGA GGAGGTGAAG TCGTCGCCGC TGAAGGCCGC GCCGAACGGC
TTCGAGCCGA CCAGCCCCGA GGCGCGCGCC GCGCTGGAAT CGCTGGTGCG GGATTCCTAC
GCGTGGTTTC GCGATCTGGT GAAGCAGCGC CGCGCCATGG ACGACGATCA GCTCGGCATC
GTCGCCGACG GCCGCGTCTT CACCGGCCGA CAGGCGGTGG GTCTGAAGCT GATCGATCAG
CTCGGCGACG AGAAGACCGC GGTGGCGTGG CTCGAAACCG AGAAGCGGGT CAAGAGCGGC
CTGCCGGTGC GCGACTTCAA GCTGTCGCCG CAATTCGGCG ACCTGACATT TCTGCGGGCC
GCAGCGTCGA TCACGCTCGA TGCGCTCGGC CTCGGCGTGA TCGCCCGACA GGTGGAGCAG
TCCGGCGCGA TGCATCTGGG CCTCGACGGC ATGCTCGCTT TGTGGGTGCC GGGTAGCACC
CGCTGA
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| Protein sequence | MSLDSDVIVD RRRIRRKLTF WRVAAVLVAI GAVIAVGAMV SPAGPALTTS GSIARIKIDG
LIRSNSERVE ALERLEKSNS AAVIVHINSP GGTTAGSEEL YTALMRLKAK KPMVVVVEGL
AASGGYIAAL ASDHIIAQQS SLVGSIGVLF QYPNVSELMK TVGVKVEEVK SSPLKAAPNG
FEPTSPEARA ALESLVRDSY AWFRDLVKQR RAMDDDQLGI VADGRVFTGR QAVGLKLIDQ
LGDEKTAVAW LETEKRVKSG LPVRDFKLSP QFGDLTFLRA AASITLDALG LGVIARQVEQ
SGAMHLGLDG MLALWVPGST R
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