Gene RPB_0617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0617 
Symbol 
ID3908310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp695453 
End bp696250 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content69% 
IMG OID637882506 
Productmolybdenum cofactor biosynthesis protein 
Protein accessionYP_484239 
Protein GI86747743 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0476] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.230334 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.726284 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAGCG CCGAGGAACT CGAACGCTAT GCCCGCCATA TCGTGCTGCG CGAGGTCGGC 
GGGCCGGGGC AGGCGGCGCT GCGGCGCGCG CGGGTGCTGG TGGTCGGCGC CGGCGGGCTC
GGCGCGCCGG TGCTGATGTA TCTGGCCGCC GCCGGCGTCG GCACGCTGCA CATCGTCGAC
GACGATGTGG TGTCGCTGTC GAATTTGCAG CGCCAGGTGA TCCACGCCAC GCCGGATGTC
GGCGCTCGCA AGGTCGACAG CGCGGCGGCG CGAATTCATG CGCTCAATCC GCATGTGCAG
GTGGTGCCGC ATCCGACGCA TCTCACCTCC GCGAATGCGC TGGGGCTGAT CGGCGATTGC
GACCTGGTGC TCGACGGCTC GGACAATTTC GCCACGCGCT ATCTGGTGTC GGACGCCTGC
TTCATCGCAA AGAAGCCGCT GATCACCGCG GCGCTCGGCC AATTCGACGG CTCGCTGACC
ACGATCCGGG CGCATGAGAA AAATGCGCAG GGCGAGCCCA ACCCGACCTA TCGCTGCCTG
TTTCCGGAAG CGCCGCCGCC CGGCACGGTG CCGGCCTGCG AGGAGGCCGG CGTGATGGGC
GCGCTCGCCG GCCTGCTCGG CTCGATGATG GCGCTGGAGG CGATCCGCGA AATCGTCGGC
TTCGGCGAGG GGCTGGTCGG GCGGCTGCTG ATGATCGACG CCCGCGCGAT GCGATTCGAG
ACGCTGCGCT ATGCGCGCGA TCCGGCCAAT CCGCTGAACG GGGATATGGC GCGCATCGTC
GATCTCAGCG CGCATTGA
 
Protein sequence
MLSAEELERY ARHIVLREVG GPGQAALRRA RVLVVGAGGL GAPVLMYLAA AGVGTLHIVD 
DDVVSLSNLQ RQVIHATPDV GARKVDSAAA RIHALNPHVQ VVPHPTHLTS ANALGLIGDC
DLVLDGSDNF ATRYLVSDAC FIAKKPLITA ALGQFDGSLT TIRAHEKNAQ GEPNPTYRCL
FPEAPPPGTV PACEEAGVMG ALAGLLGSMM ALEAIREIVG FGEGLVGRLL MIDARAMRFE
TLRYARDPAN PLNGDMARIV DLSAH