Gene RPB_0612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0612 
Symbol 
ID3908305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp690512 
End bp691738 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content68% 
IMG OID637882501 
Product3-oxoacyl-(acyl carrier protein) synthase I 
Protein accessionYP_484234 
Protein GI86747738 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACGGG TTGTTGTCAC GGGGATGGGG ATCGTCTCAT CGATCGGAAA CAACACACAG 
GAGGTGCTGG CGAGTCTGCA CGACGCCAAG TCGGGCATCA CCCGCGCCGA GAAGCACGCC
GAGCTGGGGT TCCGCTCGCA GGTCCAGGGC CTGCCGTCGC TGAATCCGGC CGACGTGGTG
GATCGCCGCG CGATGCGGTT CCTCGGCGAG GGCGCGGCGT GGAACCACGT CGCGATGGAA
CAGGCGCTGG CCGATTCCGG GCTGGAGGAG AAAGACATCT CCAATCCGCG CACCGGCATC
GTGATGGGCT CCGGCGGCCC GTCGGCGCGC ACCATCGTCG AGGCCGCCGA CACCACGCGG
ACCAAGGGCC CGAAGCGCGT CGGCCCGTTC GCGGTGCCGA AGGCGATGAG CTCGACCGCG
TCGGCGACGC TCGCCACCTG GTTCAAGATC AAGGGCGTCA ACTACTCGAT CTCGTCGGCC
TGCGCGACCT CCAACCACTG CATCGGCAAC GCCTACGAGC TGATCCAGTG GGGCAAGCAG
GACGTGGTGT TCGCCGGCGG CTGCGAGGAA CTCGACTGGT CGCTGTCGGT GCTGTTCGAC
GCGATGGGGG CGATGAGCTC CAAGTACAAC GACACCCCGG CCACCGCGTC GCGCCCCTAC
GACGTGTCGC GCGACGGCTT CGTGATCGCC GGCGGCGCCG GCGTGCTGGT GCTGGAAGAG
CTGGAACACG CCAAGGCGCG CGGCGCCAAG ATCTACGGCG AGATCATCGG CTACGGCGCC
ACCTCGGACG GCTACGACAT GGTGGCGCCC TCGGGCGAAG GCGCCGAGCG CTGCATGCAG
ATGGCGCTCG CCACCACCGG CGGCATCAAG ATCGACTACA TCAACCCGCA CGCGACCTCG
ACGCCGGCCG GCGACCCGCC GGAACTGCAG GCGCTCCGCA ACGTGTTCGG CGTCGGCGAC
AAATGCCCGC CGATTTCCGC CACCAAGGCG CTGACCGGGC ATTCGCTCGG CGCCACCGGC
GTGCAGGAGG CGATCTATTC GCTGTTGATG ATGCAGAACG GCTTCATCTG CGAGAGCGCC
AACATCACCG AGCTCGACCC GGCCTTCGCC GACATGCCGA TCGTGCGCAA GCGGATCGAC
AACGCCCAGC TCGGCGCGGT GCTGTCGAAT TCGTTCGGCT TCGGCGGCAC CAATGCGACG
CTGGTGTTCA AGCGGCTGGA CGCGTGA
 
Protein sequence
MRRVVVTGMG IVSSIGNNTQ EVLASLHDAK SGITRAEKHA ELGFRSQVQG LPSLNPADVV 
DRRAMRFLGE GAAWNHVAME QALADSGLEE KDISNPRTGI VMGSGGPSAR TIVEAADTTR
TKGPKRVGPF AVPKAMSSTA SATLATWFKI KGVNYSISSA CATSNHCIGN AYELIQWGKQ
DVVFAGGCEE LDWSLSVLFD AMGAMSSKYN DTPATASRPY DVSRDGFVIA GGAGVLVLEE
LEHAKARGAK IYGEIIGYGA TSDGYDMVAP SGEGAERCMQ MALATTGGIK IDYINPHATS
TPAGDPPELQ ALRNVFGVGD KCPPISATKA LTGHSLGATG VQEAIYSLLM MQNGFICESA
NITELDPAFA DMPIVRKRID NAQLGAVLSN SFGFGGTNAT LVFKRLDA