| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0608 |
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| Symbol | |
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| ID | 3908301 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 683880 |
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| End bp | 685568 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637882497 |
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| Product | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor |
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| Protein accession | YP_484230 |
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| Protein GI | 86747734 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.729764 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCTCGT TGTTCAAGCG CGCCGGCAAT GCTCCGTCTC CCGCAGCGAT TCTGGATGCG
CTCAATCGCT CCCAGGCGAT CATCGAATTC AATCTCGACG GCGTCGTGCT GAACGCGAAC
GAGAATTTCC TGGCGGCGCT CGGCTACTCG CTCGACGAGA TCAAGGGCAA GCACCACAGC
ATCTTCATCG ATTCGCAGGA GGCCAAGAGC GACGCGTATC GCCAGTTCTG GGCCGGTCTG
AAATCCGGCC GATACCAGAG CGGAGAGTTC AAGCGGATCG CCAAGGGCGG CCGCGACATC
TGGATCCAGG CCTCGTACAA TCCGGTGTTG AACACCGACG GCGAGCCGAT CTGCGTGGTG
AAATACGCCA CCGACATCAC GCCGGCGAAG CGGCGGGCGA TGGAGGATGC CGGCAAGATC
GCGGCGATCG GGCGCGCCCA GGCGGTGATC GAATTCGCGC TCGACGGCAC CATCCTCGAT
GCCAATCCCG GGTTTCTCGG CGCGATGGGC TACACGCTCG ACGAAATCAA GGGCAAGCAT
CATTCGATGT TCGTCACGCC GCAGGAGCGC GCCAGCGCCG CCTATCGCGA GTTCTGGGCG
CAGCTCAATC GCGGCGAATA TCTCGCCTCC GAATACAAGC GGATCGGCAA GGGCGGTCGC
GAAGTCTGGA TTCTCGCGTC CTACAATCCG ATCCTCGACG ACACCGGCCG GCCGTTCAAG
GTCGTCAAAT TCGCCACCGA CGTCACCGCG CAGAAGCTCG AGACCGCCGA CCTCGCCGGC
CAGATCGATG CGATCGGCAA GTCGCAGGCG GTGATCGAGT TCGGCATCGA CGGCACCGTC
CTGGTCGCCA ACGACAATTT CCTCCACGCG CTGGGCTACA CGCTGGCCGA GATCAAGGGC
AAGCATCATT CGATGTTCGT CGAGCCGGCC GAGCGCGACA GCGAGGCCTA TCGCAGGTTC
TGGGCGGAAC TCGCCGCCGG CAAGTATCAG GCCGCGGAGT ACAAGCGGAT CGGCAAGGGC
GGCAAGGAAG TCTGGATTCA GGCGTCGTAC AATCCGATCC TCGATCTCAA CGGCAAGCCG
TTCAAGGTGG TGAAATACGC CACCGACACC ACCCGGCAGG TGCTGATCCG GCTCGGCAAC
GAGCGGGTGC GCGGGATGAT GGAATCGGTC GCCGCCGGCG CCGAGGAACT GAACGCGTCG
GTGCGCGAGA TTTCCGAGGC GATGACAAAG TCGCGCGAGA CGGCGCTGTC CGCGGTCGGC
GAGGTCGACG CCGCCGACGG CCAGGCCAAC CGGCTCAACG AGGCCGCGCA GGCGATGACC
GGGATCGTCG AACTGATCGG CCACATCACC GGGCAGATCA ATCTCTTGGC GCTGAACGCG
ACCATCGAAT CGGCGCGCGC TGGCGAGGCC GGGCGCGGCT TCGCGGTGGT CGCCTCGGAG
GTCAAGAACC TCGCCAATCA GGCCAAGCAG GCCACCGACA AGATCGGCGC CGAGATCGAG
AATCTGAACG GCATTTCCGG CGACGTGGTC GGCGCGCTGG GCAAGATCAA GACCGCGATC
CAGAACGTCA GCGAATACGT CACCTCGACC GCCGCCGCGG TCGAAGAACA GAGCACGGTG
ACCGGCGAAA TGTCGTCGAG CATGCAGCGC GCCGCCGCCG AAGCCGCCGC GATGGCGGCG
GGCGGCTGA
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| Protein sequence | MFSLFKRAGN APSPAAILDA LNRSQAIIEF NLDGVVLNAN ENFLAALGYS LDEIKGKHHS
IFIDSQEAKS DAYRQFWAGL KSGRYQSGEF KRIAKGGRDI WIQASYNPVL NTDGEPICVV
KYATDITPAK RRAMEDAGKI AAIGRAQAVI EFALDGTILD ANPGFLGAMG YTLDEIKGKH
HSMFVTPQER ASAAYREFWA QLNRGEYLAS EYKRIGKGGR EVWILASYNP ILDDTGRPFK
VVKFATDVTA QKLETADLAG QIDAIGKSQA VIEFGIDGTV LVANDNFLHA LGYTLAEIKG
KHHSMFVEPA ERDSEAYRRF WAELAAGKYQ AAEYKRIGKG GKEVWIQASY NPILDLNGKP
FKVVKYATDT TRQVLIRLGN ERVRGMMESV AAGAEELNAS VREISEAMTK SRETALSAVG
EVDAADGQAN RLNEAAQAMT GIVELIGHIT GQINLLALNA TIESARAGEA GRGFAVVASE
VKNLANQAKQ ATDKIGAEIE NLNGISGDVV GALGKIKTAI QNVSEYVTST AAAVEEQSTV
TGEMSSSMQR AAAEAAAMAA GG
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