Gene RPB_0606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0606 
Symbol 
ID3908299 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp681358 
End bp682377 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content68% 
IMG OID637882495 
Producthypothetical protein 
Protein accessionYP_484228 
Protein GI86747732 
COG category[S] Function unknown 
COG ID[COG3528] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCGTT GGACTGCCAA GCTCGCCACG GTCGTGATCG CGACCCTGCT GTCGCACGGC 
GCGCTCGCGC AGCGGGCGGT GCTGATCGGC GAGAACGATA CGGTCGCGGA TACCGATCGC
GACTACACGT CGGGTTTCCG GCTCTCCTTC GTGTTCGACA ATTTTTCGCG CGATCTGCTC
GCCGGGCAGG CGTTCGATCT GGTTCGTCCC GCGCTGATCA CCTATGGGTC GCCGAGCGGC
TCGGTGCGGC AGCAGTTCGA ATGGATCGCG CTGGCGCAGA ACATCTACAC GCCGGACCGC
GACACCCGGG GCACCTACAC GCCGGGCGTC GACCGCCCGT TCGGCGGCTG GCTCTACACC
GGCTTCAGCG TTGCGCAGGA AACGGGTCGC CGCCAGCTCG ATTCGTTCGA GCTGCAGGTC
GGCGCGGTCG GCGGCAATGC GTCGCTGGCG CAGGCGGTGC AGTCGAGCTT CCACAGCGTG
CTCGGCCAGG CGTCGCCGGT GATCAACGGC TACGAGCTGC GCAACGAGCC CGGCATCCTG
CTGGCGTGGG ACCGGCGCTG GAAATTCGGC ACCGCGTTCG GCAACGGCTT CGGCGTCGAC
ATCATTCCGT CGCTGGGTTT GACCGCCGGC AACGTCTTCA CCTATGGCGA GGCCGGCGCG
ATCGTCCGGT TCGGCCGCGC GCTGTCGACC ACCTGGGGCC CGACGGTGAT TCGCCCCGGC
GTGTCGGGCG CGAACTTCGT CAGCCCGGAT CCGGATGCAC CGTTCTGGGG CTTCTCGCTG
TTCGGCGGCG CCCAGGCCCG CGGCGTCGCG CGCAACATCT TCCTCGACGG CAACACCTTC
AGCAGCGGCC TGCATGTCAG CCGGGACGCC TTCGTCTACG ATCTCGTCGC CGGCGCCGAA
GTGTTCAACC AGGCCGGCTT CCTGGCCTCG CTGAGCTGGG TCCGCCGCTC GCGCGAATAC
ACCACGCAGA CCCGGGCCTA TTCGGACTAC GCGTCGCTCG CGCTGGCCTA TCGTTTCTGA
 
Protein sequence
MRRWTAKLAT VVIATLLSHG ALAQRAVLIG ENDTVADTDR DYTSGFRLSF VFDNFSRDLL 
AGQAFDLVRP ALITYGSPSG SVRQQFEWIA LAQNIYTPDR DTRGTYTPGV DRPFGGWLYT
GFSVAQETGR RQLDSFELQV GAVGGNASLA QAVQSSFHSV LGQASPVING YELRNEPGIL
LAWDRRWKFG TAFGNGFGVD IIPSLGLTAG NVFTYGEAGA IVRFGRALST TWGPTVIRPG
VSGANFVSPD PDAPFWGFSL FGGAQARGVA RNIFLDGNTF SSGLHVSRDA FVYDLVAGAE
VFNQAGFLAS LSWVRRSREY TTQTRAYSDY ASLALAYRF