| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0598 |
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| Symbol | nusA |
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| ID | 3908291 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 670952 |
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| End bp | 672571 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637882487 |
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| Product | transcription elongation factor NusA |
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| Protein accession | YP_484220 |
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| Protein GI | 86747724 |
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| COG category | [K] Transcription |
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| COG ID | [COG0195] Transcription elongation factor |
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| TIGRFAM ID | [TIGR01953] transcription termination factor NusA
[TIGR01954] transcription termination factor NusA, C-terminal duplication |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGTCA GCGCCAACAA GCTGGAATTG CTGCAGATCG CCGACGCGGT GGCGCGGGAG
AAATCGATCG ACCGCGGCAT CGTGATCGCC GCGATGGAAG ACGCGATCGC GAAGGCGGCG
CGCGCCCGCT ACGGCTCGGA GACCGACGTC CACGCCGAGA TCGACGCCAA GAAGGGCGAA
TTGCGGCTGT CGCGCCATAT GCTGGTGGTC GAAAACGTCG AGAACCCCGC CAACCAGATC
TCGCTGAAGG CCGCGCAGCG CGCCAACCCC GGCGCGCAGA TCGGCGACAC CATCGCCGAC
ACGCTGCCGC CGCTGGAATA CGGCCGCATC GCCGCGCAGT CGGCCAAGCA GGTGATCGTG
CAGAAGGTGC GCGAGGCCGA GCGTGACCGG CAATACTCGG AATTCAAGGA TCGCATCGGC
GACATCGTCA ACGGCGTCGT CAAGCGCGTC GAATACGGCA GCGTGATCGT CGATCTCGGC
CGCGGCGAGG CGATCGTGCG CCGCGACGAG ATGCTGCCGC GCGAATCGTT CCGCAACGGC
GACCGCGTCC GCGCCTACAT CTTCGACGTC CGCCGCGAGA CCCGCGGCCC GCAGATCTTC
CTGTCGCGCA CTCATCCGCA GTTCATGGCC AAGCTGTTCG CCCAGGAAGT GCCGGAAATC
TACGACGGCA TCGTCGAGAT CAAGGCGGTC GCCCGCGATC CGGGCTCGCG CGCCAAGATC
GGCGTGGTGT CGCGGGATTC CTCGGTCGAT CCGGTCGGCG CCTGCGTCGG CATGCGCGGC
TCGCGCGTTC AGGCCGTGGT CAACGAGCTG CAGGGCGAGA AGATCGACAT CATCCCGTGG
TCGCCGGACA TCGCCACTTT CGTGGTCAAC GCGCTGGCGC CGGCCGAAGT CTCGAAGGTC
GTGATCGACG AAGATCGCGA GCGCATCGAG GTTGTGGTTC CCGACACCAA TAACCAATTA
TCCCTTGCGA TCGGCCGTCG CGGCCAGAAC GTTCGTTTGG CCTCGCAGCT CACCGGCTGG
GACATCGACA TCCTGACCGA GACCGAGGAA TCCGAGCGCC GCCAGGCCGA TTTCGAGAAT
TCGACCCGGG TGTTCATGGA AGCGCTGAAC GTCGACGAAG TGGTCGGCCA GCTGCTCGCC
TCCGAGGGGT TCACCTCGGT CGAGGAACTG GCGCTGGTCG ATATCCGCGA ACTGGCGTCG
ATCGAGGGTT TCGACGAGGA AACCGCGACC GAGCTGCAGG CCCGCGCCAG CGAATATCTC
GATCGGGTGG AGACGGAAAT GGAGGCGCGG CGCCTGGAAC TCGGCGTCGA GGACGCCCTC
AAGGACGTCC CCGGCATCAC CTCGAAGATT CTGGTCAAGC TCGGCGAGGG CGACGTCAAG
ACGGTCGAGG ATCTGGCCGG CTGCGCCACC GACGATCTGG TCGGCTGGAC CGAGCGCAAG
GAAGGCGCCG AGCCGGTGAA GTTCGCCGGC ATTCTCGACG GCGTCGAGGG CGTCACGCGC
GACGAGGCCG AAGACCTGAT CATGCAGGCC CGCGTCAAGG CCGGCTGGAT CACCGAGGAG
GAACTCGCCA GCAGCAAGGG CGAGGCCGCC ATTGCCGAGA CCGAAGCCGA GGCGGAGTGA
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| Protein sequence | MAVSANKLEL LQIADAVARE KSIDRGIVIA AMEDAIAKAA RARYGSETDV HAEIDAKKGE
LRLSRHMLVV ENVENPANQI SLKAAQRANP GAQIGDTIAD TLPPLEYGRI AAQSAKQVIV
QKVREAERDR QYSEFKDRIG DIVNGVVKRV EYGSVIVDLG RGEAIVRRDE MLPRESFRNG
DRVRAYIFDV RRETRGPQIF LSRTHPQFMA KLFAQEVPEI YDGIVEIKAV ARDPGSRAKI
GVVSRDSSVD PVGACVGMRG SRVQAVVNEL QGEKIDIIPW SPDIATFVVN ALAPAEVSKV
VIDEDRERIE VVVPDTNNQL SLAIGRRGQN VRLASQLTGW DIDILTETEE SERRQADFEN
STRVFMEALN VDEVVGQLLA SEGFTSVEEL ALVDIRELAS IEGFDEETAT ELQARASEYL
DRVETEMEAR RLELGVEDAL KDVPGITSKI LVKLGEGDVK TVEDLAGCAT DDLVGWTERK
EGAEPVKFAG ILDGVEGVTR DEAEDLIMQA RVKAGWITEE ELASSKGEAA IAETEAEAE
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