Gene RPB_0588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0588 
Symbol 
ID3908281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp660846 
End bp661343 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content62% 
IMG OID637882477 
Productferric uptake regulator family protein 
Protein accessionYP_484210 
Protein GI86747714 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACAAG TGCTCGTCGC TCCATCCCAT TCAAACGATG CGTTGACGCC GATGTCCGAT 
ATGAAGGCCA CTGATATGAA GGCCACCGAA ATCGAAGCCC GCTGTGCCGC CACCGGCATG
CGCATGACGG AGCAGCGTCG CGTGATCGCG CGGGTGCTCG CCGAGGCGGT CGACCATCCC
GACGTCGAGG AGCTGTACAC CCGCTGCGTC GCCGTCGACG ACAAGATCTC GATCTCGACC
GTGTACCGCA CCGTCAAGCT GTTCGAGGAC GCCGGCATCA TCGAGCGGCA CGATTTCCGC
GAGGGCCGCG CCCGCTACGA GCAGATGCGC GACAGCCATC ATGATCATCT GATCAATCTG
CGCGACGGCA AGGTGATCGA GTTCACCAAC GAGGAGATCG AACTGCTACA GGCCGAGATC
GCCCGCAAGC TCGGCTACAA GCTGGTCGAT CACCGGCTCG AGCTGTATTG CGTCCCGCTC
GACGACGACA AGGCCTGA
 
Protein sequence
MAQVLVAPSH SNDALTPMSD MKATDMKATE IEARCAATGM RMTEQRRVIA RVLAEAVDHP 
DVEELYTRCV AVDDKISIST VYRTVKLFED AGIIERHDFR EGRARYEQMR DSHHDHLINL
RDGKVIEFTN EEIELLQAEI ARKLGYKLVD HRLELYCVPL DDDKA