Gene RPB_0586 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0586 
Symbol 
ID3908279 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp659647 
End bp660339 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content74% 
IMG OID637882475 
Productpeptidase M22, glycoprotease 
Protein accessionYP_484208 
Protein GI86747712 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1214] Inactive homolog of metal-dependent proteases, putative molecular chaperone 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGATCC TCGCCATCGA TACCGCGCTC GACGCCTGCG CCGCAGCGGT GCTGGACACC 
GGCGCGAACC GGCTGCTCGC CGGGGAATCG CAGTCGATGC AGCGCGGCCA TGCCGAGGCG
CTGATGCCGC TGCTCGGCCG CGTGATGCAA TCCTCCGGCA TCGGCTTCGC CGATCTCGAC
CGCATCGCAG TGACGACCGG ACCTGGTAGT TTCACCGGGT TGCGGGTCGG GCTGTCCGCC
GCGCGCGGCA TCGCGCTCGC CGCCGACAAG CCGATCGTCG GCCTCACCAC GCTGTCCGCC
TTCGCCGCGC CGCTGGTCAG CGAGCGCGAC GACACCCCGA TCCTGTCGGC GATCGATGCG
CGGCACGATC AGGTCTATTA TCAGCTCGTC AGCGGCAACG GCACGCGTCT GGTGTCGCCG
CGGGTCGGCC CGATCGGCGA GGCGCTGGAG ACGGCGCGCC ACGGCGCGCC GCGGCTGGTC
GGCAATGCGG CGGGCCTGCT CGCCGCGCGC TGGCCGGCGC TCACCCCGCC GGCGCCGTTG
ATCGATCCGC AGCCCGCGCC CGACATCTTC TGGGTCGCCT GGCTCGGCGC CGCCGCCACG
CCCGAGGCCG CGCCGGCGCG GCCGTTCTAT CTGCGCGCGC CGGACGCGAG GCCTCAGGCC
GATGCGCTGG CGCGGGCGCA GCCCGCTGCA TGA
 
Protein sequence
MLILAIDTAL DACAAAVLDT GANRLLAGES QSMQRGHAEA LMPLLGRVMQ SSGIGFADLD 
RIAVTTGPGS FTGLRVGLSA ARGIALAADK PIVGLTTLSA FAAPLVSERD DTPILSAIDA
RHDQVYYQLV SGNGTRLVSP RVGPIGEALE TARHGAPRLV GNAAGLLAAR WPALTPPAPL
IDPQPAPDIF WVAWLGAAAT PEAAPARPFY LRAPDARPQA DALARAQPAA