Gene RPB_0571 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0571 
Symbol 
ID3908264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp644125 
End bp644928 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content70% 
IMG OID637882460 
ProductABC transporter related 
Protein accessionYP_484193 
Protein GI86747697 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.260264 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.332215 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGTGT CCTCCTCGCG CGATCTCGAC AGCCCGGCGG CAGGTCCGGC GATCCGCCTG 
CGCGCGGTGA CCAAGACCTA TCGCAACGGC GTGCCGGCGC TCGGGCCGAT CGATCTCGCC
GTCGGCCGCG GCGAATTCGT CTCGCTGCTC GGCCCCTCCG GCTGCGGCAA GTCGACCGCG
CTGCGGCTGA TCGCCGGTCT CGCAGAACCG TCCTCCGGCC GCATCGAAAT GGCGTCGCAA
GCGCAGCGCG GGCATTCGAT CGGCTTCGTG TTTCAGGAGC CGACGCTGAT GCCGTGGACC
AGCGTGCGCG GCAATGTCGG CCTGCCGCTG AAGCTCGCGC ACGCGCCGTC GGCGGAGATC
GCCCGCCGCG TCGACGCGGC GTTGGCGCGG GTCGAGCTGT CGGACTTCGC CGAGGCCTAT
CCGCGCGAAT TGTCCGGCGG CATGAAGATG CGGGCGTCGT TGGCGCGCGC GCTGGTCACC
GATCCGGATA TCCTCCTCAT GGACGAGCCG TTCGCCGCGC TCGACGAGAT CACCCGCTTC
CGGCTCAATG ACGATCTCTT GGCGCTGTGG CGCGAGCTCG GCAAGACCGT GCTGTTCGTG
ACGCATTCGG TGTTCGAGTC GGTGTATCTG GCGCAGCGCG TGGTGGTGAT GTCGCCGCGG
CCGGGGCGCA TCGCCGCGGA CTTCCGGATC GATGCGCCGG AGCCGCGCAA CGAGGACTTC
CGCACCTCGG CGGACTACGC GGCGCAATGC CGCGAGGTCT CGCGCGCGCT GGCGGAGACC
GGCGCCACGA AGGTGCGCGC ATGA
 
Protein sequence
MAVSSSRDLD SPAAGPAIRL RAVTKTYRNG VPALGPIDLA VGRGEFVSLL GPSGCGKSTA 
LRLIAGLAEP SSGRIEMASQ AQRGHSIGFV FQEPTLMPWT SVRGNVGLPL KLAHAPSAEI
ARRVDAALAR VELSDFAEAY PRELSGGMKM RASLARALVT DPDILLMDEP FAALDEITRF
RLNDDLLALW RELGKTVLFV THSVFESVYL AQRVVVMSPR PGRIAADFRI DAPEPRNEDF
RTSADYAAQC REVSRALAET GATKVRA