| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0570 |
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| Symbol | |
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| ID | 3908263 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 642990 |
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| End bp | 644114 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637882459 |
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| Product | perplasmic binding protein of ABC transporter |
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| Protein accession | YP_484192 |
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| Protein GI | 86747696 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.288854 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.233067 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCCCG CCTTCCTGTC GCGAGCGTTA ATCGGGGCGG TCGCCGTGGC TCTGCTGGCC
GTGCCGGTCC AGGCGTCGCC GCCGCCGGCC CCGGCCAAGC CGGCCGAAAA GCCGGCGCCG
CCACCGCCGC CGCCGAAAAA GCCGCCGCCG CCGGTCGTCC AGCCGATCCG CAAAGTGCCG
GAAGGCGGCT TCGACAAGCT GTCGTTCGGC ACCAATTGGG TCGCCGAGGG CGAGCATGGC
GGCTTCTTCC AGGCGGTCGC CGACGGCACC TACAAGGCCT ACGGCCTGGA TGTGACGATC
GTGCCGGGCG GGCCGAACGT CAACAATCGC GCGCTGCTGC TCGCCGGCAA GCTCGACTTC
TTCATGACCG CCAATACGCT GCAATCGTTC GACGCGGTCG CCAACAACGT GCCGGTGGTG
GCGATCGCCG CGGTGTTCCA GAAGGACCCG CAGGTGTTCC TGAGCCATCC GGAATCCAGG
GTCGAGAAGC TCGAGGATCT GAAGCGGCTG ACGCTGTTCG TCTCCAAGGA GGGCATCGCC
AGCTACTTCC AGTGGCTGAA ATCCGAATAC GGCTTCAGCG AAGCCAAGGT GAAGCCCTAC
ACGTCGAATC CGCAGCCTTT CATCATCGAC AAGAACTCGG CGATGCAGGG CTACGTCACC
TCGGAGCCGT TCGTGATCGA GCAGAAGGCG AAGTTCAAGC CGAACGTGCT GCTGCTGGCT
GATGACGGCC TCGACGGCTA TTCGACGCTG ATCGAGACCC GGCGCGACCT GATCGACAAG
AATCCGGAGA TGATCCAGCG CTTCGTCGAT GCCTCGATGA TCGGCTGGTA CAACTACCTC
TACGGCGACA ATTCGGCCGG CAACGCGCTG ATCAAGTCGC TCAATCCGGA GATGACCGAC
GAGATGCTGG CCTATTGCGT CGACAAGATG AAGCAGTACG GCATCGTCGA TTCCGGCGAC
GCGGTGACCA ACGGCATCGG CGCGATGAGC GACGCGCGCT ACGCCAGCTT CTTCGATAAA
ATGTCGCGCG CCGGCGTGGT CAAGCGCGAT CTGGATTTTC GCCGGGCCTA TACGCTGCAA
TTCACCAACA AGGGCGTCGG CGTCGATCTG CGGCCGAACA AATAG
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| Protein sequence | MTPAFLSRAL IGAVAVALLA VPVQASPPPA PAKPAEKPAP PPPPPKKPPP PVVQPIRKVP
EGGFDKLSFG TNWVAEGEHG GFFQAVADGT YKAYGLDVTI VPGGPNVNNR ALLLAGKLDF
FMTANTLQSF DAVANNVPVV AIAAVFQKDP QVFLSHPESR VEKLEDLKRL TLFVSKEGIA
SYFQWLKSEY GFSEAKVKPY TSNPQPFIID KNSAMQGYVT SEPFVIEQKA KFKPNVLLLA
DDGLDGYSTL IETRRDLIDK NPEMIQRFVD ASMIGWYNYL YGDNSAGNAL IKSLNPEMTD
EMLAYCVDKM KQYGIVDSGD AVTNGIGAMS DARYASFFDK MSRAGVVKRD LDFRRAYTLQ
FTNKGVGVDL RPNK
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