Gene RPB_0563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0563 
Symbol 
ID3909603 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp633423 
End bp634421 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content67% 
IMG OID637882452 
Productalcohol dehydrogenase 
Protein accessionYP_484185 
Protein GI86747689 
COG category[R] General function prediction only 
COG ID[COG2130] Putative NADP-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0841274 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0336788 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCG TCAACCGCCA GGTGCTGCTG ATCGAGAAGC CGAAGGAGAA ACTCGGCCTT 
GAGCATTTCC GCATGGCGGA AGCGGCGATG CCGGAGCCGA AGGACGGCGA GGCGCTGGTC
CGCGTGCGCT ACATTTCGCT CGACGCCGCC AACCGCGCCT GGATGCAGGG CGCGACCTAT
CGGGCCGCGG TCGAGACCGA CAGCGTGATG CCCGGCGGCG GCATCGCCGA GGTTGTCAGT
TCGAAAGCGC CGGGATTGTC GCCCGGCGAC ATCGTGTTCG CCGACACCGG CTGGCAGGAC
TACGCGGCGC TGCCGGCCAA GCATCTCACC AAGCTGCCGA AGGTCGAGCC GCTGACGCAT
CTCCTCAGCG TCTACGGCAT CGCCGGCTTG ACCGCTTATT TCGGCCTGCT CGATATCGGC
CAGCCGCGCG CCGGCGAGAC CGTCGTGGTG TCGGCCGCGG CAGGCTCGGT CGGCTCGATC
GTCGGGCAGA TTGCGAAACT CAAGGGCTGC CGTGTCGTCG GCATCGCCGG CGGCAAACAG
AAGTGCGACT GGCTGGTCAA CGAGCTCGGC TTCGACGCCG CGGTCGACTA CAAGGACGGC
GCGCTGTTCA AGGCGCTGCG CGCCGCGGCG CCGAACGGCA TCGACGTGTA TTTCGACAAT
GTCGGCGGCG ACATTCTCGA AGCCTGTCTG GCGCAGATGA ATCTCAAGGG CCGCATCGCC
TGCTGCGGCG CGGTCTCGCA ATACGACCGC ACGCCGTCCG CCACCGGCCC GCGCGGCATC
CCCGGCCTGA TCGTGGTGAA GCGCCTGATC ATGCAGGGCT TCATCGTGAT GGACTACATG
GACCAACGCG ACGAGGCGGT CGCCAAGCTG CAAGGCTGGG TCGAGAGCGG CAAGCTCAAG
GTGCAGGAAG ACGTCATCGA CGGCCTGGAG AACACGCCGG CCGCGCTGAT CGGCCTGCTG
GCGGGCGAGA ACCGCGGCAA GCGGATGGTG CGGGTGTGA
 
Protein sequence
MTAVNRQVLL IEKPKEKLGL EHFRMAEAAM PEPKDGEALV RVRYISLDAA NRAWMQGATY 
RAAVETDSVM PGGGIAEVVS SKAPGLSPGD IVFADTGWQD YAALPAKHLT KLPKVEPLTH
LLSVYGIAGL TAYFGLLDIG QPRAGETVVV SAAAGSVGSI VGQIAKLKGC RVVGIAGGKQ
KCDWLVNELG FDAAVDYKDG ALFKALRAAA PNGIDVYFDN VGGDILEACL AQMNLKGRIA
CCGAVSQYDR TPSATGPRGI PGLIVVKRLI MQGFIVMDYM DQRDEAVAKL QGWVESGKLK
VQEDVIDGLE NTPAALIGLL AGENRGKRMV RV