Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0557 |
Symbol | |
ID | 3909596 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 627512 |
End bp | 628315 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637882445 |
Product | enoyl-CoA hydratase/isomerase |
Protein accession | YP_484179 |
Protein GI | 86747683 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.588532 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0360183 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCACCA AGGATATTGC CGTCGAAGTC ACCGGCCACG TCGCGCTGAT CGAGATCCGG CGGCCGCCGC TGAACTTTTT CGACATCGCG CTGATCCAGC AGATCGCCGA TGCGCTCGAC GCCATCGACG CCGATCCGGA GATCCGCGCC ACCGTGCTGG CGGCGCAGGG CAAGGCGTTC TGCGCCGGCG CCAATTTCGG CGATCCGGCG CGGCAGGAGG CCGATCCGCA GGCCGCCAAG GGCGACCCCG CCGACAGCCT CGGCCAGATC GGCCATCTGT ACATCGAGGC GGTCAGGATT TTTCGGGCCA AGAAGCCGAT CGTCGCGGCC ATCCACGGCG CCGCGATCGG CGGCGGGCTC GGGCTCGCGG TGTCGGCGGA TTTCCGCGTC ACCTGCCCGG AGGCGCGGTT CTCGGCGAAT TTCACCAAGC TCGGCTTCCA TCCCGGCTTC GGCCTGACGG TGACGCTGCC CGAACTGATC GGGCGCAACA ATGCCGAGCT GATGTTCTAC ACCTCGCGCC GCGTCACCGG CGAGGACGCG GTGAAGATGG GGCTGGCCAA CGAGCTGGTG CCGCTGAACG AGGTGCGTAG CGCGGCGCTG AAGCTCGCCC GCGAAATCGC CGAATGCGCG CCGCTGGGCC TGTTGTCGAC CCGCGCGACG ATGCGCGCCA CGCTGGCCGA CCGGGTGATG GAAGCCACCA GGCACGAACT CGCCGAACAG ACGCGGCTGC GCTCCACCGA AGACTTCAAG GAAGGCGTGA AAGCCACCGA AGAACGCCGC ATCGCGCATT TCAAGGGGCG GTAG
|
Protein sequence | MTTKDIAVEV TGHVALIEIR RPPLNFFDIA LIQQIADALD AIDADPEIRA TVLAAQGKAF CAGANFGDPA RQEADPQAAK GDPADSLGQI GHLYIEAVRI FRAKKPIVAA IHGAAIGGGL GLAVSADFRV TCPEARFSAN FTKLGFHPGF GLTVTLPELI GRNNAELMFY TSRRVTGEDA VKMGLANELV PLNEVRSAAL KLAREIAECA PLGLLSTRAT MRATLADRVM EATRHELAEQ TRLRSTEDFK EGVKATEERR IAHFKGR
|
| |