Gene RPB_0557 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0557 
Symbol 
ID3909596 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp627512 
End bp628315 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content68% 
IMG OID637882445 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_484179 
Protein GI86747683 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.588532 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0360183 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCA AGGATATTGC CGTCGAAGTC ACCGGCCACG TCGCGCTGAT CGAGATCCGG 
CGGCCGCCGC TGAACTTTTT CGACATCGCG CTGATCCAGC AGATCGCCGA TGCGCTCGAC
GCCATCGACG CCGATCCGGA GATCCGCGCC ACCGTGCTGG CGGCGCAGGG CAAGGCGTTC
TGCGCCGGCG CCAATTTCGG CGATCCGGCG CGGCAGGAGG CCGATCCGCA GGCCGCCAAG
GGCGACCCCG CCGACAGCCT CGGCCAGATC GGCCATCTGT ACATCGAGGC GGTCAGGATT
TTTCGGGCCA AGAAGCCGAT CGTCGCGGCC ATCCACGGCG CCGCGATCGG CGGCGGGCTC
GGGCTCGCGG TGTCGGCGGA TTTCCGCGTC ACCTGCCCGG AGGCGCGGTT CTCGGCGAAT
TTCACCAAGC TCGGCTTCCA TCCCGGCTTC GGCCTGACGG TGACGCTGCC CGAACTGATC
GGGCGCAACA ATGCCGAGCT GATGTTCTAC ACCTCGCGCC GCGTCACCGG CGAGGACGCG
GTGAAGATGG GGCTGGCCAA CGAGCTGGTG CCGCTGAACG AGGTGCGTAG CGCGGCGCTG
AAGCTCGCCC GCGAAATCGC CGAATGCGCG CCGCTGGGCC TGTTGTCGAC CCGCGCGACG
ATGCGCGCCA CGCTGGCCGA CCGGGTGATG GAAGCCACCA GGCACGAACT CGCCGAACAG
ACGCGGCTGC GCTCCACCGA AGACTTCAAG GAAGGCGTGA AAGCCACCGA AGAACGCCGC
ATCGCGCATT TCAAGGGGCG GTAG
 
Protein sequence
MTTKDIAVEV TGHVALIEIR RPPLNFFDIA LIQQIADALD AIDADPEIRA TVLAAQGKAF 
CAGANFGDPA RQEADPQAAK GDPADSLGQI GHLYIEAVRI FRAKKPIVAA IHGAAIGGGL
GLAVSADFRV TCPEARFSAN FTKLGFHPGF GLTVTLPELI GRNNAELMFY TSRRVTGEDA
VKMGLANELV PLNEVRSAAL KLAREIAECA PLGLLSTRAT MRATLADRVM EATRHELAEQ
TRLRSTEDFK EGVKATEERR IAHFKGR