Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0554 |
Symbol | |
ID | 3909593 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 624346 |
End bp | 625554 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637882442 |
Product | ureA/short-chain amide ABC transporter |
Protein accession | YP_484176 |
Protein GI | 86747680 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.930825 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0786148 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGACCCA TCCGCACCAC ACTACTCGCT TGTCTGTCGA TCGCCGCGAT CTCGGCCGCG CAGGCGCAAT CGCAGCCGCC GCTGAAGCTC GGCGCGATCC TCGACATGTC CGGCCTCTAC GCCGACATCA CCGGCACCGG CAGCGAGACC GCGGCGAAGA TGGCGGCGGA AGATTTCGGC GGCACCGTGC TCGGCCGCAA GATCGAGATC ATCGCCGCCG ATCATCTCAA CAAGGCCGAC CTCGCCGCCA GCATTGCGCG CGACATGATC GACAATCAGG GCGTCGAGGC GATCATCGAC GTCGCCGCCT CCGCCACCGC GCTCGCCGCC GGCGAGATCG CCAAGGCGCG CAACAAGATC ATCATGTATT CGGGGCCGGG CTCGGTGCGC CTGTCCAACG AGGCGTGCGG TCCCTACACC ATCCACTATT CCTACGACAC CTTCGCGCAG GCCAACGTCG CCGGTCTCGC CTCGGTGAAG CAGGGTCTCG ACACCTGGTT CTTCCTGTCG GCGGACTACG CCTTCGGGCA GGATCTCGAG CGCGACACCA CCAACGTCGT CAAGGCCTCC GGCGGCAAGG TGCTGGGCAG CGTCAAGCAT CCGATCAACA CCTCGGACTT CTCGTCCTTC CTGCTGCAGG CGCAAAGCTC GAACGCCAAG GTGATCGGGC TCGCCAATGC CGGCGGCGAC ACCATCAACG CGATCAAACA GGCGGCGGAA TTCGGCATCA CCCGCAAGGG TGGCCAGAAG ATCCTGCCGC TGCTCGCCTT CATCACCGAC ATCGACAGCA TCGGGCTCGA GACCGCCCAG GGCCTGCTGA TCGCCGGCGC GTTCTATTGG GACATGAACG ACGAGACCCG CGCGTTCTCC AAGCGCTTCA TGGAACGCAC CAAGCGGGTG CCGACCTCGG CGCAGGCGGG CCTGTATTCC GAGACGATGC ACTATCTGCA GGCGGTGAAA GCCGCCGGCA CCACCGACGC CGCGGCGGTG ATGAAGAAGA TGAAGGAAGC TCCGATCAAC GATTTCTTTG CCAGGAACGG TAAGATCCGC GAGGACGGCC GCATGGTCCA CGACATGTAT CTGTTCGAGG TCAAGAAGCC GTCGGAATCC AAAGGCCGCT GGGATTACTA CAAGCTGCTC GCCACCGTCC CCGGCGATCA GGCATTCCAG CCGCTGTCGG CATCGCGCTG CCCGCTGGTG AAGAATTAA
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Protein sequence | MRPIRTTLLA CLSIAAISAA QAQSQPPLKL GAILDMSGLY ADITGTGSET AAKMAAEDFG GTVLGRKIEI IAADHLNKAD LAASIARDMI DNQGVEAIID VAASATALAA GEIAKARNKI IMYSGPGSVR LSNEACGPYT IHYSYDTFAQ ANVAGLASVK QGLDTWFFLS ADYAFGQDLE RDTTNVVKAS GGKVLGSVKH PINTSDFSSF LLQAQSSNAK VIGLANAGGD TINAIKQAAE FGITRKGGQK ILPLLAFITD IDSIGLETAQ GLLIAGAFYW DMNDETRAFS KRFMERTKRV PTSAQAGLYS ETMHYLQAVK AAGTTDAAAV MKKMKEAPIN DFFARNGKIR EDGRMVHDMY LFEVKKPSES KGRWDYYKLL ATVPGDQAFQ PLSASRCPLV KN
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