Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0551 |
Symbol | |
ID | 3909590 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 620124 |
End bp | 621413 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637882439 |
Product | CarD family transcriptional regulator |
Protein accession | YP_484173 |
Protein GI | 86747677 |
COG category | [K] Transcription |
COG ID | [COG1329] Transcriptional regulators, similar to M. xanthus CarD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0207185 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0758016 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGCTATA TTTGGCACAT TACAAACTCG GCACGCGGTT TTGCGGCCGG GAAGGGATCC CGTCAAAAAC AACGAACAGG GGCGTGGCGG TTCCACGCGC AGGCTGTGTC ACAGAAAACG CGTAAAATGA GTGTCTCGTC CAAGGGTGCC AAGCGTGGCG CTGCGGCCGG CCGCAGCGCG ACCAACCGAT CCAGTATGTC TGCCAAGGAC ACCCGGACCG TCAAGTCCCC TGCTTCGAAG GCTGTTGCTG CCAAGACCAC GGCTCCCAAA GCCACTGCGT CCAAGACCGC TGCGTCCAAG GCCACCGTGT CCAAAACCAA GGCCTCTGTT TCACAGGCCT CCGTTTCCAA GGCCTCGAGT TCGAAGGCCG CCGCTGCCAA GGCGAGCGCC GCCAAAGCGA CTGCGAAGAC GACCACCGCA AAGGGTTCCG CTGCGAGGGC TTCGGCTCCC AAGGCGGCGG CTCTCAAGTC CTCGAAAAAC AAAAGAAGTG CAATGCCATC CAAGACTGCG AAAACTGCCG CCGCGGCGCC CGCTTCCAAG GCGGCTCCGG CCAAGTCGAC CGCCAAGCCC GCTGCCGCCA AGGCTCCGGT AGCGCCGCCG CGCGCCGCCC CGCCGAAGGC TGCCGCGAAG CCCGAGGTCA AGCCGGTGGC CGTCAAGCCG GCCGCGCCGC CCAAGGTCGA GGAGCCCAAG AAGGTCGTGA CCCAGCGTCA GGGCTTCAAG GCCAGCGAGT TCGTGGTCTA TCCGGCGCAT GGCGTCGGCC AGATCCTGGC GATCGAGGAA CAGGAAATCG CGGGCGCCAA GCTCGAACTG TTCGTCATCA ACTTCATCAA GGACAAGATG ACGCTGCGGG TGCCGACCGC CAAGGTCGCC AATGTCGGGA TGCGCAAGCT GTCCGACCCG GCGCTGGTGA AGAAGGCGCT GGAGACGCTC AAGGGCCGCG CCCGCGTCAA GCGCACGATG TGGTCGCGCC GCGCCCAGGA ATACGAAGCC AAGATCAATT CGGGCGACAT CGTCGCGATC GCCGAAGTGG TCCGCGACCT GTTCCGCTCG GACTCGCAGC CCGAGCAGTC CTACAGCGAA CGCCAGCTCT ATGAAGCGGC GCTCGACCGG CTGTCGCGCG AAATCGCGGT GGTGCAGCAG GTCACCGAGA CCGAAGCCGT CAAGGAAGTC GAAGGCCAGC TCGCCAAGAG CCCGCGCCGC GGCGCCAAGG CCGAGGCGGA CGCCGAAGGC GATGCCGAAG GTGATCTCGA CGGCGACACC GACGACGCGG TGACCGACGA AGCCGCCTGA
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Protein sequence | MCYIWHITNS ARGFAAGKGS RQKQRTGAWR FHAQAVSQKT RKMSVSSKGA KRGAAAGRSA TNRSSMSAKD TRTVKSPASK AVAAKTTAPK ATASKTAASK ATVSKTKASV SQASVSKASS SKAAAAKASA AKATAKTTTA KGSAARASAP KAAALKSSKN KRSAMPSKTA KTAAAAPASK AAPAKSTAKP AAAKAPVAPP RAAPPKAAAK PEVKPVAVKP AAPPKVEEPK KVVTQRQGFK ASEFVVYPAH GVGQILAIEE QEIAGAKLEL FVINFIKDKM TLRVPTAKVA NVGMRKLSDP ALVKKALETL KGRARVKRTM WSRRAQEYEA KINSGDIVAI AEVVRDLFRS DSQPEQSYSE RQLYEAALDR LSREIAVVQQ VTETEAVKEV EGQLAKSPRR GAKAEADAEG DAEGDLDGDT DDAVTDEAA
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