| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0550 |
|---|
| Symbol | |
|---|
| ID | 3909589 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | + |
|---|
| Start bp | 619654 |
|---|
| End bp | 619992 |
|---|
| Gene Length | 339 bp |
|---|
| Protein Length | 112 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637882438 |
|---|
| Product | 4Fe-4S ferredoxin, iron-sulfur binding |
|---|
| Protein accession | YP_484172 |
|---|
| Protein GI | 86747676 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1146] Ferredoxin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.351369 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0632378 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTTACG TCGTCACTGA AAACTGCATC AAGTGCAAAT ACACCGATTG CGTTGAAGTC
TGCCCCGTCG ATTGCTTCTA CGAGGGCGAC AACATGCTGG TCATCCATCC GGACGAATGC
ATCGATTGCG GCGTGTGCGA ACCGGAATGC CCGGCCGATG CGATCAAGCC GGACACCGAG
CCGGGGCTCG AGAAGTGGCT CGAGCTGAAT TCGGAATACG CCAAGACCTG GCCCAACCTG
ACCCAGAAGA AAGACTCGCC GGACGACGCC AAGACGTTCG ACGGCGTGGA AGGCAAGTTC
GAGAAGTTCT TCTCGCCGGA GCCAGGCACC GGCGATTGA
|
|---|
| Protein sequence | MTYVVTENCI KCKYTDCVEV CPVDCFYEGD NMLVIHPDEC IDCGVCEPEC PADAIKPDTE
PGLEKWLELN SEYAKTWPNL TQKKDSPDDA KTFDGVEGKF EKFFSPEPGT GD
|
|---|
| |