Gene RPB_0549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0549 
Symbol 
ID3909588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp619310 
End bp619579 
Gene Length270 bp 
Protein Length89 aa 
Translation table11 
GC content66% 
IMG OID637882437 
ProductRNA-binding S4 
Protein accessionYP_484171 
Protein GI86747675 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1188] Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.213997 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0613086 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGCGTC AGCGACTCGA CAAATGGCTC TGGCATGCGC GGATCGTGCG TGCCCGCAGC 
ACCGCGGCGG CGCTGGTCGA AAGCGGCCAT GTCCGCGTCA ACGGCGTGCG GGAGAAGTCG
CCCGGACACG GGATCAAGAC CGGCGACGTC GTGACGATTG CGCTGGATCG TAGCGTGCGG
GTTCTGAAGG TGATTGGATT CGCCGAGCGT CGCGGCGATG CCGCGTCGGT CACTGGACTT
TATGCCGATC TCGAGGTGCC CCGGGAATAG
 
Protein sequence
MERQRLDKWL WHARIVRARS TAAALVESGH VRVNGVREKS PGHGIKTGDV VTIALDRSVR 
VLKVIGFAER RGDAASVTGL YADLEVPRE