Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0545 |
Symbol | |
ID | 3909584 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 610543 |
End bp | 613704 |
Gene Length | 3162 bp |
Protein Length | 1053 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637882433 |
Product | multi-sensor hybrid histidine kinase |
Protein accession | YP_484167 |
Protein GI | 86747671 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0920041 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCTCT CGACCCGCCT GACGCTGGCG ATGGTGGCGC TGGTCCTGGT GACCACGGCG GTCCTCGGCT TTTTGAACTA CCGCAGCATC GTCGAATTGG TGATGCCCCG CGCCTTGCTG CAATTGCAGA CGCGCTCGCA GCTTCATGCG CTGCTGATGG ATGCGTATCT GCGCGGCACG CGCGCGGACG CGGTCAGTGC GCAGGCCTCC ACGACCCTCC GCGATCTGCT CGCCAACCGC GACCGCGCCG GCGAGGCGAC CCCCGACTGG CGTCGGCGAA TCGAGGATCG GTTCGCCGCG GAAATGGCCG GGAAGCCGAA CTCCGCCATC CTGCGCATCC TCGGGCCCGA TGACGGCGGC CGCGAACTGG TGCGGGTCGA CCGACTGGGC CCGAACGGCA CGATCCGCGC GACACCGGCG GCGCAGCTGA CGCGACGCGG CGACCGCGGC TATTTCAAGC AAGGCATGGC GCTGCCACCC GGCGAGGTGG CGATCTCCCG GATCGAACTG AACAAGACGG CGACCGGACT GGAAATTCCC CACGTCCCCA CCGTGCGCAT CATGGCGCCG ATCGATGCCG GCGACGGCAC GCGGCTCGGC GTGCTGGTGA TCAACACCAA TCTCGGCGCG CTGTTCGAGC GGGTCCGAAA CAGCGTCGTC GTCGGCAACC TGACCTACAT CGTCAACGAC GCCGGCGACT ATCTGCTGCA TCCCGACCGC TCGCGCGAAT TCGGCTTCGA TTTCGGCAGG CCCAGCCGCG TCCAGGATGA TTTCCCGGCA TTCGCGGCAC TGCTCGACGG CAAGGACACC ACCCCGCGCG TGATCGAGGA TCGCACCGGG CAACGCTTCG GCGCCGGCTG GGGCTGGGTG CGTCTCGCCG ACGGTCCGAC GATCGGCGTG ATCGAGATGC GGCCGTATCA ATCCCTGACC TCGGTGCAGA CGGCGGTCCG CAATTCGACG CTGACGGGCG GTGCGGTCGC GGTGCTGGTG GCGATGCTGA TGGCGTTTCC GCTGGCGAAG TCGCTGACCC GGCCGCTGGT CCGCATCACC CGCTCGGTTC AGGCGTTCGC GCGCGGCGAA AAATTGGAGC TCGCTCCCGG CGGCGGCCAG GAGATCAAGC TGCTGGCCGA AGCCTTTTCA CAGATGACCC GCGAAGCCGA GCGCAAAGCG ATCGCCCTCG CCGAGGAGGC GGAAGAGCGC AGCCGCATCG CCGGGGTGCT GCAGAACACC ATCGACAACA TGGTCGATCC GGTGCTGGTC GCGGATGCGC GCGGCATGGT GATGCTCACC AATCCGGCGG CGCGCGACCT GTTCGGGACG CTGTCCGGCG TCGGCCTGCT CAACACCACC CGCTCGTTCG ACCGCTACTA TCCGGACGGA ACCCCGCTGC CGCCCGACCA ATCGCCGCTG CTGCGCGCCT ATCGCGGCGA AACCATCGTC AATTTCGAAT TCATGGTGCA GCCGATCGGA TCGGACCGCA GATCCTATCT GATCGCGAAC GGCCGGCCGC TGCGCAGCGA GACCGGCGAG AACCAGGGCG CGGTGATGGT GTATCACGAC ATCACCCAGA CCAAGACGGC CGAGAAGGCG TTGCGCCGCA GCGAGCAGAT GGCGCGGGCG ATCATCGACA CCGCGCTCGA CGCCTTCGTG CAGATCGACG CGCTCGCCAC GATCACCGAA TGGAGCCCGC ACGCCGAGGA AATGTTCGGC TGGCGTCGCG CCGAAGCGAT CGGCCGCAAC GTGTTCAAGT TGATCATCCC GCCCGACCAG TTCGAGCAGC GCACCGAGGA GTTCAAGCAG TTCGCATCGA CGCTCGGGCG CGACAGCTCG GGCTTCCGCG TCGAGATCGA ATCGATCCGC AACAACGGCA CGCCGATCCC GCTCGAAGTC GCGATGACCG CGCTGTATCG CGACGGCAGC TTCGTCATCA ACGCGTTCCT GCGCGACCTG ACCGAGAAGA TCGCGTTCGA GGAGCAACTC CGGCAATCGC AGAAGATGGA GTCGATCGGC CAGCTCACCG GCGGCATCGC GCACGACTTC AACAACATGC TGACGGTGAT CACCGGCACC ATCGACATCA TCAGCGACGG CGTCGCCGAG CAGCCGCATC TGGCGAACAT CGCCAAGCTG ATCAGCGAGG CGGCCGATCG CGGCGCCGAG TTGACCCGGC TGCTGCTCGC CTTCGCCCGC AAGCAGCCGC TGCGGCCGGA CGACACCGAC GTCAACGCCC TGGTGGCCGG GCTGCAGAGC CTGCTGCGGC CGACACTGGG CGAACAGATC GAAGTCGAGA CCTCGCTCGC GGACAACGTC TGGCCGATTT ACGTCGATCG CGGCCAGCTC GAATCCGCGC TGGTCAATCT CGCGGTCAAC GCCCGCGACG CGATGCCGAA CGGCGGCAAG CTGACGCTGG AGACCTGCAA CATCGTGGTC GACCAGGAAT TCGCCAGGCG GCTCGGCAAT GTCGAGGTCG GCTCCTATGT GATGATCGCG ATCACCGATT CGGGCTGCGG CATTCCCGAG GCGATCCGCG GCAAGGTGTT CGATCCGTTC TTCACCACCA AGGACATCGG AAAAGGCACC GGGCTCGGGC TGAGCATGGT GTACGGCTTC ATCAAGCAGT CCGGCGGACA CATCACGCTG TACAGCGAGG AAGGCCTCGG CACCACGTTC CGGCTGTATC TGCCGCGCGC CACCGCCGAG ATCGAACGCC AGGCGCCGGC GACGTCGGAG CAGGGCGCGA TCGGCGGCAC CGAGACCATC CTGGTCGTCG AGGACGACGC CATGGTGCGC AGCTACGTCA ACGCTCAGCT CAAGAGCCTC GGCTACACCA CCCTGTCGGT CGGCAACGCC ACGGCCGCGC TGTCGATCGG AGACAGCGAC ACGCAATTCG ACCTGCTGTT CACCGACGTG GTGATGCCGG GCCCCTACAA CGGCGTGCAG CTGGCCGCCG AAATGAGCCT GCGCCGGCCC GGGCTGAAGG TGCTGTTCAC CTCCGGCTAT TCCGAGAACG CCCTGATCCA CAACGACCGG ATCGATTCCG ATATCCTGCT GTTGTCGAAG CCGTATCGGC GCAGCGATCT CGCCCGCATG ATCCGCCTCG CGCTGAGTCC CGCCGCCGAC ACCGTGACGG CAGCCGGCGA AGTGGACAAT GCGACGGTCT GA
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Protein sequence | MKLSTRLTLA MVALVLVTTA VLGFLNYRSI VELVMPRALL QLQTRSQLHA LLMDAYLRGT RADAVSAQAS TTLRDLLANR DRAGEATPDW RRRIEDRFAA EMAGKPNSAI LRILGPDDGG RELVRVDRLG PNGTIRATPA AQLTRRGDRG YFKQGMALPP GEVAISRIEL NKTATGLEIP HVPTVRIMAP IDAGDGTRLG VLVINTNLGA LFERVRNSVV VGNLTYIVND AGDYLLHPDR SREFGFDFGR PSRVQDDFPA FAALLDGKDT TPRVIEDRTG QRFGAGWGWV RLADGPTIGV IEMRPYQSLT SVQTAVRNST LTGGAVAVLV AMLMAFPLAK SLTRPLVRIT RSVQAFARGE KLELAPGGGQ EIKLLAEAFS QMTREAERKA IALAEEAEER SRIAGVLQNT IDNMVDPVLV ADARGMVMLT NPAARDLFGT LSGVGLLNTT RSFDRYYPDG TPLPPDQSPL LRAYRGETIV NFEFMVQPIG SDRRSYLIAN GRPLRSETGE NQGAVMVYHD ITQTKTAEKA LRRSEQMARA IIDTALDAFV QIDALATITE WSPHAEEMFG WRRAEAIGRN VFKLIIPPDQ FEQRTEEFKQ FASTLGRDSS GFRVEIESIR NNGTPIPLEV AMTALYRDGS FVINAFLRDL TEKIAFEEQL RQSQKMESIG QLTGGIAHDF NNMLTVITGT IDIISDGVAE QPHLANIAKL ISEAADRGAE LTRLLLAFAR KQPLRPDDTD VNALVAGLQS LLRPTLGEQI EVETSLADNV WPIYVDRGQL ESALVNLAVN ARDAMPNGGK LTLETCNIVV DQEFARRLGN VEVGSYVMIA ITDSGCGIPE AIRGKVFDPF FTTKDIGKGT GLGLSMVYGF IKQSGGHITL YSEEGLGTTF RLYLPRATAE IERQAPATSE QGAIGGTETI LVVEDDAMVR SYVNAQLKSL GYTTLSVGNA TAALSIGDSD TQFDLLFTDV VMPGPYNGVQ LAAEMSLRRP GLKVLFTSGY SENALIHNDR IDSDILLLSK PYRRSDLARM IRLALSPAAD TVTAAGEVDN ATV
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