Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0540 |
Symbol | |
ID | 3909579 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 604962 |
End bp | 605588 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637882428 |
Product | hypothetical protein |
Protein accession | YP_484162 |
Protein GI | 86747666 |
COG category | [S] Function unknown |
COG ID | [COG0586] Uncharacterized membrane-associated protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.33721 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACGCCG TTCTCGATGC CCTGATCGCC TTCGCCTCCG CCCATCGCGA GCTGGCCTAT CTGACGCTGT TCACGGCCGC GCTGCTGGAG GCGGTGCCGG TGCTGGGCAC ATTGGTGCCG GGCTCGACCA TCATCCTGGC GCTGAGCGCG CTGATTCCGG GCGGCCAGCT CGATCTGGTC GGCGTGCTCG CGGCGGCGGC GGCCGGGGCC GCGCTCGGCG ACGGCGCCGC CTACTGGATC GGACATCGCC AGCAGCGGCG CATCCTGTCG GCATGGCCGA TGGCGCGCTA TCCCGAGCTG GTGGCGCGCG CCGAGGCGTT CTTCGTGAGA TTCGGCGGCT GGGCGGTGTT GTTCGCCCGC TTCGTGCCGC CGATTCGCGC CTTCGTGCCG ATCACCGCCG GCGCGCTGCA GATGCCGCCG GCGCGGTTCT TCGCGATCAA CATCCCGGCG ATCCTGCTTT GGGCGCCGGC GCATGTGTTG CCCGGCGTCG TCGCCGCCAC CGCGCTGGAG CAGGCGCACG GCCGATGGCA TCACTGGCTG CCGGTGGTCG CGGGCGTGGC CGGCGTGGTC GTTCTAGCTG GCTGGCTGCT GTGGCGGCGA CGGCGGGGTA AGGCGCAGGC GACCTGA
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Protein sequence | MNAVLDALIA FASAHRELAY LTLFTAALLE AVPVLGTLVP GSTIILALSA LIPGGQLDLV GVLAAAAAGA ALGDGAAYWI GHRQQRRILS AWPMARYPEL VARAEAFFVR FGGWAVLFAR FVPPIRAFVP ITAGALQMPP ARFFAINIPA ILLWAPAHVL PGVVAATALE QAHGRWHHWL PVVAGVAGVV VLAGWLLWRR RRGKAQAT
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