Gene RPB_0537 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0537 
Symbol 
ID3909576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp602558 
End bp603901 
Gene Length1344 bp 
Protein Length447 aa 
Translation table11 
GC content68% 
IMG OID637882425 
Producthypothetical protein 
Protein accessionYP_484159 
Protein GI86747663 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4536] Putative Mg2+ and Co2+ transporter CorB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.947499 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.569692 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGAGC GCGAGATCAT GGACTGGGTG ACGTCCGGTA TCGTCATCGC CTGTCTGTTC 
GGCTCGGCGT TCTTCTCCGC CAGCGAGACC GCACTGACCG CGGCCTCGCG CGCCAACATG
ATGCGGCTGG CGAAGCAGGG CAGCCGCAAC GCCGGCATCG TCGGCCGGCT GCTGGCGACG
CGCGAGCGGA TGATCGGCGC GCTGCTGCTC GGCAACAACA TCTTCAACAT CGGCGCCTCG
GCGCTGGCGA CCGGCCTGTT CACGGCCTGG TTCGGCGAGT TCGGCGTGCT CTACGCCACC
GCGGTGATGA CCGCGCTGGT GGTGATCTTT GCCGAGGTGC TGCCCAAGAC CGTCGCCATC
AACGCGCCGG ATCGTTTCGC GCTGCTGGTC GCCAAGCCGA TGCGGCTGAT GGTGCTGGTG
CTCGGCCCGC TGCTCACGGT GATCGAGGCG CTGGTCCGCG TGCTGATGCG GCTGCTCGGC
ATCAAGGTCG GCGCGCATCA GTCGCTGCTG TCGGCGACCG AGCGGCTGCG CGGCGCGGTC
GAACTGATCC ATCACGAAGG CGGCGTCGCC AAGCACGACC GCGACATGTT CGGCGGCCTG
CTCGATCTCA GCGAATTGCA GGTCTCCGAC GTGATGGTCC ACCGCACCGA GATGGTGATG
GTCAACGCCG ACCTGCCGCC GGAGGAACTG GTTCGCGAGG TGCTGGCCAC CGAGTACACC
CGGATTCCGC TGTGGCGCGA GAAGCCGGAG AACATCATCG GCGTGCTGCA CGCCAAGGAT
CTGCTGCGGG CGATGCGCGC CGCCGACGGT GACGCCGGCA AGATCGACGT CAACAAGATC
GCGCTGCCGC CGTGGTTCGT GCCGGAGATG CGGCTGGTGT CGGAGCAGCT CAAGGCGTTC
CGCTCGCGCA AGACCCACTT CGCGCTGGTG GTCGACGAAT ACGGCGAAGT CGAAGGCATG
GTGACGCTCG AGGACATCCT CGAGGAAATC GTCGGCGACA TCTCCGACGA GCACGACGTC
GTGGTCGCCG GCGTTCGCAC CCAGCCGGAC GGCTCGGTCG TGGTGGATGG TTCGGTGCCG
ATCCGCGATC TCAATCGCGC GATGGACTGG AATCTGCCGG ACGAGGAAGC CACCACGATC
GCCGGCCTGG TGATCCACGA GGCGCGCTCG ATCCCGGTGC GGGGCCAGAG CTTCACCTTC
CACGGCTTCC GCTTCCGGGT GCTGCGCCGC GAGCGCAATC GCATCACCGC GCTGCGCATC
GTCCCCGTGC TGCGCGAGAC AGAAGCCGAG CTCGCCGACA AGAAGTCCGG GAAGATCGCG
CGCATCGGCG GCCCCGCGGC GTGA
 
Protein sequence
MSEREIMDWV TSGIVIACLF GSAFFSASET ALTAASRANM MRLAKQGSRN AGIVGRLLAT 
RERMIGALLL GNNIFNIGAS ALATGLFTAW FGEFGVLYAT AVMTALVVIF AEVLPKTVAI
NAPDRFALLV AKPMRLMVLV LGPLLTVIEA LVRVLMRLLG IKVGAHQSLL SATERLRGAV
ELIHHEGGVA KHDRDMFGGL LDLSELQVSD VMVHRTEMVM VNADLPPEEL VREVLATEYT
RIPLWREKPE NIIGVLHAKD LLRAMRAADG DAGKIDVNKI ALPPWFVPEM RLVSEQLKAF
RSRKTHFALV VDEYGEVEGM VTLEDILEEI VGDISDEHDV VVAGVRTQPD GSVVVDGSVP
IRDLNRAMDW NLPDEEATTI AGLVIHEARS IPVRGQSFTF HGFRFRVLRR ERNRITALRI
VPVLRETEAE LADKKSGKIA RIGGPAA