| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0535 |
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| Symbol | |
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| ID | 3909574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 600799 |
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| End bp | 601416 |
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| Gene Length | 618 bp |
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| Protein Length | 205 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637882423 |
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| Product | shikimate kinase |
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| Protein accession | YP_484157 |
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| Protein GI | 86747661 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0703] Shikimate kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.74412 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGACA GCGCACCGTC GGCCGCCGCC GCCAGGTCCC AGCAGGAAGC CGAGATCGTC
GCGGCGCTGG GCGAGCGCCC GGTCGTGCTT ATCGGCATGA TGGGCGCCGG CAAGTCGACC
GTCGGCCGCC GGCTGGCGCT GCGGCTCGGG CTGCCGTTTC TGGACGCCGA CACCGAGATC
GAACAGGCCG CGGCGATGAC GATCCCGGAG ATTTTCGAAA CCCACGGCGA GCCGCATTTC
CGCGACGGCG AGGCCCGGGT GATCGCCCGG CTGCTCGATG GCGGCGCCAA GATTCTCGCG
ACCGGCGGCG GCGCGTTCAT GCGCGAGGAG ACCCGCGCGC GGATTCGCGA CAAGGCGATC
TCGATGTGGC TCGAGGCCGA GGCCGACGTC ATCCTGCGCC GGGTCAAGCG CCGCGCCGAC
CGGCCGCTGC TGCAGACCGC GGATCCGGCC GGAACCATCG CCCGGCTGAT CGGCGAGCGC
TATCCGGTGT ATCGTGGCGC CGACCTGACG ATCGCATCGC GCGATGTGCC GCACGAGAAA
ATCGTCGACG AATGCGTTGC CGCGCTGCAC GACTATCTCT GCAGCGCACC CGCCCCAACC
CTGAGCGAGA CACCATGA
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| Protein sequence | MSDSAPSAAA ARSQQEAEIV AALGERPVVL IGMMGAGKST VGRRLALRLG LPFLDADTEI
EQAAAMTIPE IFETHGEPHF RDGEARVIAR LLDGGAKILA TGGGAFMREE TRARIRDKAI
SMWLEAEADV ILRRVKRRAD RPLLQTADPA GTIARLIGER YPVYRGADLT IASRDVPHEK
IVDECVAALH DYLCSAPAPT LSETP
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