| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0531 |
|---|
| Symbol | |
|---|
| ID | 3909570 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 596465 |
|---|
| End bp | 597922 |
|---|
| Gene Length | 1458 bp |
|---|
| Protein Length | 485 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637882419 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_484153 |
|---|
| Protein GI | 86747657 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3034] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGAGAA CTCCGCTGCT GCGCGCGCTG CTGGCCTCCG CCGCGATCGC CGCGAGCGCC
GTGCTGGCCG GCTGCAACAG CGACCAGATG TCGCTCGCCC GCAACGCCAA GGCCAACCAG
CCGGTGCCTC CCAAGCTGGT CGCCGCGATG CAGGACAAGA ACATGGACCT GCAGTCGCCG
ATCCTGGTGC GGCTGTTCAA GCAGGAAGCC GAGCTCGAGG TCTGGAAGCA GGACCGCAGC
GGCGTCTACG CGCTGCTCAA GACCTACCCG ATCTGCCGCT GGTCCGGCGA TCTCGGCCCG
AAGATCCGCG AGGGCGACCG CCAGGCGCCG GAAGGGTTCT ATTCGATCTC GCCCGGCCAG
ATGAACCCGC AATCGTCCTA TTACCTGTCG TTCAACACCG GCTATCCGAA CGCCTTCGAC
AAGTCACTCG GCCGCACCGG CTCGCAACTG ATGGTGCACG GCGACTGCTC GTCGCGCGGC
TGCTACGCGA TGACCGACGA ACAGATCGCC GAGATCTATG CGCTGGGGCG CGAATCGTTC
TTCGGCGGCC AGCGCGCGTT CCAGCTGCAG GCCTATCCGT TCAAAATGAC GCCGGTGAAC
TTCGCCAAGC ACCGCAACAA CCCGAACATG CCGTTCTGGC GGATGCTGAA GCAAGGCTAC
GACCATTTCG AGGTGACGCG GCAGGAGCCG AAGGTCGATT TCTGCGAGCA GAAATACGTG
TTCGACGCAG CACCCCCGCC GGGCGCGACC AAGCCGCTGG CGTTCAACGC CTCCGCCAAA
TGCCCGGCCT ATACGGTGCC GGCCGACATC GCCGACGCGG TGCGCGAGAA GGATCACAAG
GACCAGACCA AGCTCGCCGA GCTGATTTCG AAGGGGACGC CGGTGGCGCG GCTGCGCACC
GGGATCGACG GCGGCATGCA TCAGGTGTTC GCCTCGAAGA TCCCCGACGC CTCGACCGGC
CTGTCCGAAG CCGACGACAG CTCGCCGGTG GCGCTCGCGG CATTCGACCG CGCGCCCGGC
ACGATCCCGC CGACCGTCAA TCCGCCGCGG CCGTCCGACA ATCTGCTGCA GAAGGCGTCC
GAGACGACGG CCGTGGCCGC GACCACCGCA CCGTCGACAC CGCGCGTGGC CTCGGCGACG
AAAGACGATA TCGGCGGCCT GCTGTCCGGC CTGTCGCGCC GGGTCGGCAG CGGCGAGACC
ACCGCCTCGA CCACACCGCC GCCGTCCTCG CCGCCGCAGG TGGTCACCGC GCGGCGCCAA
GACACCATGC CCGCGCCGCC CCGGCCGCAG GCCGCGGTGC CGAAGCCGGC AGACACCAAG
CAGGCCGCCA CCAAGCCCCA GCTCAAGCCC TCGGTCGACA CCGGCGCCGC AAAGCCGGCG
ACGACGGCCA CGATCACCGG CGCCGCGCCC GTGGTGTCGT CGAATAATTT CGACAGCCGG
TTCTCGGCGT TCCGCTGA
|
|---|
| Protein sequence | MTRTPLLRAL LASAAIAASA VLAGCNSDQM SLARNAKANQ PVPPKLVAAM QDKNMDLQSP
ILVRLFKQEA ELEVWKQDRS GVYALLKTYP ICRWSGDLGP KIREGDRQAP EGFYSISPGQ
MNPQSSYYLS FNTGYPNAFD KSLGRTGSQL MVHGDCSSRG CYAMTDEQIA EIYALGRESF
FGGQRAFQLQ AYPFKMTPVN FAKHRNNPNM PFWRMLKQGY DHFEVTRQEP KVDFCEQKYV
FDAAPPPGAT KPLAFNASAK CPAYTVPADI ADAVREKDHK DQTKLAELIS KGTPVARLRT
GIDGGMHQVF ASKIPDASTG LSEADDSSPV ALAAFDRAPG TIPPTVNPPR PSDNLLQKAS
ETTAVAATTA PSTPRVASAT KDDIGGLLSG LSRRVGSGET TASTTPPPSS PPQVVTARRQ
DTMPAPPRPQ AAVPKPADTK QAATKPQLKP SVDTGAAKPA TTATITGAAP VVSSNNFDSR
FSAFR
|
|---|
| |