| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0530 |
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| Symbol | |
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| ID | 3909569 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 593320 |
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| End bp | 596160 |
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| Gene Length | 2841 bp |
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| Protein Length | 946 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637882418 |
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| Product | preprotein translocase subunit SecA |
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| Protein accession | YP_484152 |
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| Protein GI | 86747656 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.630171 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGGCG CGTTCGCCCG CAAACTCTTC GGCTCTTCGA ACGATCGCAG GATCAAGGCG
TACCAGGCCC GCGTCGCCGC CATCAACGCG CTGGAGCCGG AAGTCGCGGC GCTGTCCGAC
GAGGCGCTGC GCGCCCGCAC CGATGAGTTC CGCGCCCAGC TCGCCGCCGG CAAGACGCTC
GACGATCTGC TGGTGCCGGC CTTCGCCACC GTGCGCGAGG CCGCCAAGCG CACCCTCGGC
CAGCGCCATT TCGACGTGCA GCTGATCGGC GGCATGGTGC TGCACGAGGG CGACATCGCC
GAGATGAAGA CCGGCGAAGG CAAGACGCTG GTCGCCACGC TGGCCTGCTA TCTCAACGCG
CTGGCCGGCA AGGGCGTCCA CGTCGTCACC GTCAACGACT ACCTCGCCAG CCGTGACGCC
GGCTGGATGG GCCAGATCTA CAGCTTCCTC GGCATGTCGA CCGGCGTGAT CGTGCATGGC
CTCGACGACG GTCAGCGCCA GAAGGCCTAT GCCTGCGACA TCACCTACGG CACCAACAAC
GAATACGGCT TCGACTATCT GCGCGACAAC ATGAAGTACC GGCTCGAGGA CATGGTCCAG
CGCGGCCATT TCTTCGCCAT CGTCGACGAA GTCGACTCGA TCCTGATCGA CGAGGCGCGC
ACCCCGTTGA TCATCTCCGG TCCGCTCGAC GACCGCTCCG AGTTCTACAA CACCATCGAC
ACCTTCATTC CGAGCCTCGA CAAGTCGGAC TACGACGTCG ACGAGAAGCA GCGCTCGGTG
GCGCTGACCG AAGCCGGCAT GGAGAAGATC GAGACGCTGC TGCGCGACGC CGGCCAGCTC
AAGGGCGAGT CGCTGTACGA CGTCGAGAAC GTCTCGGTGG TGCACCACAT CAACCAGGCG
CTGCGCGCCC ACACGCTGTT CCAGCGCGAC AAGGACTACA TCGTCCGCAA CGACGAGGTG
GTGATCATCG ACGAGTTCAC CGGCCGCATG ATGCAGGGCC GGCGCTATTC GGAAGGCCTG
CACCAGGCGC TGGAAGCCAA GGAACACGTC ACGGTCCAGC CGGAAAACCA GACGCTGGCC
TCGATCACCT TCCAGAACTA CTTCCGGATG TACGGCAAGC TCGCCGGCAT GACCGGCACG
GCGGCGACCG AAGCCGACGA ATTCTACGAC ATCTACAAGC TCGAAGTGGT CGAGATCCCG
ACCAACCTGC CGATCTCGCG TCTCGACGAG GACGACGAGG TGTATCGCAC GCAGGCGGAG
AAATACGCCG CGATCCTCGC AGAGGTCGAG CGCGCCAACA AGCGTATGCA GCCGGTGCTG
GTCGGCACCG CGTCGATCGA GAAGTCCGAG GTGCTGGCCG ATCTGCTGCT GAAGAACGGC
TACAAGCAGA TCGATTTCGG CGATCCGAAG GGGCTCGACA AGCTCTACGC CGCCGCCCGC
GCCGGCAAGC CGGCCAAGCT GTTCGCGGTG CTGAATGCGC GCTTCCACGA GCAGGAGGCC
TATATCGTCG CCGAAGCCGG CGTGCCCGGC GCGATCACCA TCGCCACCAA CATGGCCGGC
CGCGGCACCG ACATCAAACT CGGCGGCTCG CTGGAAATGC GGATCCCGCA GGAGACCGCC
GGGATCACCG ACGAGGCCGA GAAGGCCGCC AAGGTCGAGC AGATCAAGGC CGACATCGAG
CGCTTCCGCG ACATCGTGCT CAACGCCGAG GACGAGATCG AGATCGAGCC CGCCAAGGGC
AGCAAGCCGG CCAAGACCGC CAAGCGCCCC GGCGGCCTGT ACATCATCGG CTCGGAGCGC
CACGAGAGCC GCCGCATCGA CAACCAGCTC CGCGGCCGCT CCGGCCGTCA GGGCGACCCC
GGCCGCTCGA AGTTCTTCCT GTCGCTGGAC GACGATCTGA TGCGGATCTT CGGCTCCGGC
AAGCTCGACA CCATGCTGAC CCGGCTCGGC CTCAAGGAGG GCGAGGCGAT CATCCATCCG
TGGATCAACA AGGCGCTGGA AAAGGCGCAG CAGAAGGTCG AGGCGCGCAA TTTCGACATC
CGCAAGAATC TGCTGAAATT CGACGACGTC CAGAACGACC AGCGCAAGGT GATCTTCGAT
CAGCGCATCG ATCTGATGAA AGAAGACAGC GTGGTCGAAA CCGTCACCGA CATGCGCCAC
ACCTACATCG AGGATCTGGT CGCCAAGCAC GTCCCCGAGC ACGCCTATGC GGAGCAGTGG
GACGTCGCCG GCCTCAAGGA CGAGCTGCAC CGCGTCGTCG GCCTGGAGAT TCCGGTCGAC
GAATGGGCCA AGGAAGAGGG CATCGCCGAC GAGGAGCTGC TGGCGAGGAT CGTCAAGGTG
TTCGACGAGC ACATGGCGGC GAAGGTGGCG CAATGGGGCC CCGACGTGAT GCGCTACGCC
GAGAAGAGCA TCCTGCTGCA GACGCTCGAT CATCTGTGGC GCGAGCATCT GGTGATGCTG
GATCACCTGC GTCAGGTGAT CGGCCTGCGC GGCTACGGCC AGCGCGATCC GCTGCAGGAA
TACAAGTCCG AGGCGTTCGG CCTCTTCCAG GAGATGAGCG CGCATCTGCG AGAGGCGGTG
ACGGCGCAAT TGATGCGGGT CGAAATCATC CCGCCGGATC AGCCGCAGGA GCTGCCGCCG
ATGGAGGTCC ACAAAATGGA CCCCAACACC GGCGAGGACG AAATGGCGTT CGCCAACGTC
TCGCTGGCAC CTGCAGACAG CGTCGACAAG TCCGCCCGCG ACCCGAACCG CCCCGAGACC
TGGGGCAAGG TCGGCCGCAA CGAGGACTGC CCGTGCGGCA GCGGCAAGAA GTACAAGCAC
TGCCACGGCC GGTACGCGTA A
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| Protein sequence | MIGAFARKLF GSSNDRRIKA YQARVAAINA LEPEVAALSD EALRARTDEF RAQLAAGKTL
DDLLVPAFAT VREAAKRTLG QRHFDVQLIG GMVLHEGDIA EMKTGEGKTL VATLACYLNA
LAGKGVHVVT VNDYLASRDA GWMGQIYSFL GMSTGVIVHG LDDGQRQKAY ACDITYGTNN
EYGFDYLRDN MKYRLEDMVQ RGHFFAIVDE VDSILIDEAR TPLIISGPLD DRSEFYNTID
TFIPSLDKSD YDVDEKQRSV ALTEAGMEKI ETLLRDAGQL KGESLYDVEN VSVVHHINQA
LRAHTLFQRD KDYIVRNDEV VIIDEFTGRM MQGRRYSEGL HQALEAKEHV TVQPENQTLA
SITFQNYFRM YGKLAGMTGT AATEADEFYD IYKLEVVEIP TNLPISRLDE DDEVYRTQAE
KYAAILAEVE RANKRMQPVL VGTASIEKSE VLADLLLKNG YKQIDFGDPK GLDKLYAAAR
AGKPAKLFAV LNARFHEQEA YIVAEAGVPG AITIATNMAG RGTDIKLGGS LEMRIPQETA
GITDEAEKAA KVEQIKADIE RFRDIVLNAE DEIEIEPAKG SKPAKTAKRP GGLYIIGSER
HESRRIDNQL RGRSGRQGDP GRSKFFLSLD DDLMRIFGSG KLDTMLTRLG LKEGEAIIHP
WINKALEKAQ QKVEARNFDI RKNLLKFDDV QNDQRKVIFD QRIDLMKEDS VVETVTDMRH
TYIEDLVAKH VPEHAYAEQW DVAGLKDELH RVVGLEIPVD EWAKEEGIAD EELLARIVKV
FDEHMAAKVA QWGPDVMRYA EKSILLQTLD HLWREHLVML DHLRQVIGLR GYGQRDPLQE
YKSEAFGLFQ EMSAHLREAV TAQLMRVEII PPDQPQELPP MEVHKMDPNT GEDEMAFANV
SLAPADSVDK SARDPNRPET WGKVGRNEDC PCGSGKKYKH CHGRYA
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