Gene RPB_0529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0529 
Symbol 
ID3909433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp592060 
End bp592980 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content66% 
IMG OID637882417 
ProductPpiC-type peptidyl-prolyl cis-trans isomerase 
Protein accessionYP_484151 
Protein GI86747655 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0760] Parvulin-like peptidyl-prolyl isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.417087 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCTG CGTCACCCGC AGCCCGTTCG GCCCTGCGCT CCGGCATCAT CAGCGCGGCC 
GCGACCGGTT GTCTCGCTTT TGCGCTGCTC GCGAGCCCGA TGGCGCGCGC CCAGGACGCC
AACCCGGTGC TGGCGAAGGT GAACGGCGCT GAAATCCGCC AGAGCGACGT CACCCTCGCC
GAGGAAGAGC TCGGCCCGAG CCTGGCCCAG ATGGACCCGG CGACCAAGAA GGAAAACGTC
CTGTCGTTCC TGATCGATAT GAAGATCGTC GCCAAGGCCG CCGAGGACAA GAAGATCGCC
GACCGTGCGG AGTTCAAGAA GCGGCTCGAA TTCGCCCGCA ACCGCCTGCT GATGGACGAT
CTGCTCGGCG TCGAGGGCAA GGCCGCCACC ACCGACGAGG CGATGAAGAA GGTCTATGAG
GACGCCGCCA AGCAGATTTC CGGCGAGCAG GAAGTCCACG CCCGCCACAT CCTGGTCGAG
ACCGAGGACG AGGCCAAGGC GATCGCCGAG GAACTGAAGA AGGGCGCCGA TTTCGCCGAG
CTGGCGAAGA AGAAGTCCAA GGACCCGGGC GCCTCCGACG GCGGCGATCT CGGCTTCTTC
ACCAAGGACC AGATGGTGCC GGAATTCTCC GCGGTGGCAT TTGCGCTGGA GCCCGGCAAG
ATCTCCGACC CGGTGAAGAG CCAGTTCGGC TGGCACATCA TCAAGGTCGA GGAGAAGCGC
AACCGCAAGC CGCCGACCTT CGACCAGGTC AAGCCGCAGA TCGAGCAATA CGTCACCCGC
AAGGCGCAGT CGGACTACGT CACGCAGTTG CGTCAGGCCG CCAAGGTCGA GCGGCTCGAC
AAGCCGGCCG AGCCGGCCGC TTCCCCCGCC GACGCGGCAA AGCCGGCCGA GCCGGCGGCC
AAGGCCCCGG CGAAGAAGTA A
 
Protein sequence
MTPASPAARS ALRSGIISAA ATGCLAFALL ASPMARAQDA NPVLAKVNGA EIRQSDVTLA 
EEELGPSLAQ MDPATKKENV LSFLIDMKIV AKAAEDKKIA DRAEFKKRLE FARNRLLMDD
LLGVEGKAAT TDEAMKKVYE DAAKQISGEQ EVHARHILVE TEDEAKAIAE ELKKGADFAE
LAKKKSKDPG ASDGGDLGFF TKDQMVPEFS AVAFALEPGK ISDPVKSQFG WHIIKVEEKR
NRKPPTFDQV KPQIEQYVTR KAQSDYVTQL RQAAKVERLD KPAEPAASPA DAAKPAEPAA
KAPAKK