Gene RPB_0524 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0524 
Symbol 
ID3909428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp585399 
End bp585887 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content67% 
IMG OID637882412 
Productferric uptake regulator family protein 
Protein accessionYP_484146 
Protein GI86747650 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.912553 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCTT TGAAGCCGGC CTTTCCCGCC CCCGGTCACG ATCACGACCG TTGTGCCGCC 
GAAGGCATCG AGCACGCCGA ACGGATCTGT GCGGACCGCT CACAGAACCT GACGCCGATC
CGGCGGCAGG TGCTGCGGGC GCTGCTGTCC AGCCATCGCC CGCTCGGCGC CTATGAGGTG
ATCGACGAAC TGGCGCGCGT GATGCCGCGC CCGGCGCCGA TCACGGTGTA TCGCGCGCTC
GACTTCCTGA TGCAGAACGG GCTGGTGCAC CGGATCGAAA GCCGCAACGC GTTTCTCGCC
TGCGGCCGCG AACACGACGA CGCCTCCGCG GTCGCTTTCC TGATCTGCGA ATCCTGCGGT
TCGGTCGGCG AGATTCCCGC CACCGCCGTG GCGCAGAGTC TCAGCGAGGC GGCGCGCCAG
ACCGGCTTCA CGCCGAAGCT CTCGGTGGTG GAAATCACCG GCGTCTGCGG GCATTGCCAA
TCCACCTGA
 
Protein sequence
MTALKPAFPA PGHDHDRCAA EGIEHAERIC ADRSQNLTPI RRQVLRALLS SHRPLGAYEV 
IDELARVMPR PAPITVYRAL DFLMQNGLVH RIESRNAFLA CGREHDDASA VAFLICESCG
SVGEIPATAV AQSLSEAARQ TGFTPKLSVV EITGVCGHCQ ST