Gene RPB_0515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0515 
SymbolmtgA 
ID3909419 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp575982 
End bp576665 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content70% 
IMG OID637882403 
Productmonofunctional biosynthetic peptidoglycan transglycosylase 
Protein accessionYP_484137 
Protein GI86747641 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0744] Membrane carboxypeptidase (penicillin-binding protein) 
TIGRFAM ID[TIGR02070] monofunctional biosynthetic peptidoglycan transglycosylase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.737672 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCGGC TGATCCGCGT CGCGCTGCTG ACGCTGCTGC TGCTGGTCGC GGCGCCCTAC 
GTGCTGACGC TGGTGTATGG CGCGGGCCAG CCGGTCTCGA CGCTGATGGT CTGGCGTTGG
TTGGCGGGCG CGACGGTGAC CCGGCAATGG GTCGACATCG AACGGATGGC GCCGGCCTTG
CCGCGCACCG TGGTGGCCTC CGAGGACGCC AAATTCTGCA GCCACAGCGG CATCGACTGG
GACTCGGTGC GCGACGTACT CGACGATCTG CAGGACGGCG GCGAGGCCAG CCGCGGCGGC
TCCACCATCA CACAGCAGGT CGCCAAGAAC CTGTTCCTGT GGCCGGGCCG CAGCGTGGTG
CGCAAGGCGC TGGAATTTCC GTTGGCGATG TGGATCGACC TGGTGCTGTC GAAGCAGCGC
ATCCTCGAAC TCTACCTCAA CATCGCCGAA TGGGGGCCGG ACGGGCAGTT CGGCGCCGAG
GCCGGCGCCG CCTATGCGTT CGGCCGCTCG GCCGCCCAGC TGACGCCGCA GGAGGCGGCG
CTGATGGCGT CGATCCTGCC CAACCCGCGG GTGCGCAGCG CCAAGAAGCC CGGACCAGGC
GTGCGCCGGC TCGCCGCCAC CTATGTGGCG CGGGCGCGAT CGGCCGAATT GCAGCAATGC
TGGCGCGAAA ATAGCGGCTC CTGA
 
Protein sequence
MRRLIRVALL TLLLLVAAPY VLTLVYGAGQ PVSTLMVWRW LAGATVTRQW VDIERMAPAL 
PRTVVASEDA KFCSHSGIDW DSVRDVLDDL QDGGEASRGG STITQQVAKN LFLWPGRSVV
RKALEFPLAM WIDLVLSKQR ILELYLNIAE WGPDGQFGAE AGAAYAFGRS AAQLTPQEAA
LMASILPNPR VRSAKKPGPG VRRLAATYVA RARSAELQQC WRENSGS