| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0511 |
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| Symbol | |
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| ID | 3909415 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 572512 |
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| End bp | 574263 |
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| Gene Length | 1752 bp |
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| Protein Length | 583 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637882399 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_484133 |
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| Protein GI | 86747637 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain
[COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCGCCAG TCGATCCTAC GGCCGCCCAG CCGATCGCGC CGACCGAGTC TCGCGGTCCC
GATCCGGCGG AAATTCTGGC CGCGCTCGGG CAGGCGGCGT TCGTCTGGGA GCTCGCGACC
GACGCTCTCG TCTGGACCGG CCCCGCAGCA GGGCTGTTTC AGGACATTCC CGCCGGAACG
CTGGCGACCG GCGCCGGCTA CGCCTCGCTG CTCGAGCCGT CGCGCGCGAT CCGCGCCGAC
GCGCTGCTCA ACGCCTCAGC CGCGGCCGGC GCGCATTGCG TGCCGTACCG GATCGAATAC
GGCGTCCGCG CCGCGACCTC GGCGCCGATC ATCTGGATCG AGGAAAGCGG CCGCTGGCAT
CCGGGGCCCG ACGGCCGGCC CGCGCGGGTC GAGGGCATCG TCCGCGTCAA CAACGAGCGT
CATGCCCGCG ACCAGCAATT GCTGAAGCTG TCGCAGAACG ATCCGCTGAC CGGCGAACTC
AACCGCACCA ACCTGGTCGC GGCGCTCGCC GAGGCGATCG AGGAAGCCTC GCGCTTCCGC
AACAGCCTCT GCTTCATGCT GATCGGCATC GACCATCTGT CCCGGATCAA CGATTCGTTC
GGCTTCGACG TCGCCGACGA AGTGATCTAC ACCCTTTCGC AGCGGATCCG CGCACGGCTG
CGCGCCGGCG ACGAGCTCGG CCGCTTCTCC GGCAACAAGT TCGGCGTGGT GCTGAAGGCC
TGCACCATCG ACGACGCCCA TGTGGCGGCG GAGCGTTTCC TCGCCGCGAT CCGCGACGAG
ATCGTGCCGA CCCGGTCGGG CCCGGTATCG ATCACGGCGT CGATCGGCGC GGTCAGTTCG
CCGCGCCACG CCCGTACGGC CGAAGAGGCG ATCAACCGCG CCCAGGAGGC GCTGGCCGCC
GCGAAGCATC GGCGCTGCGG CGCGTTTTCG ATGTGGCGGC CGAATGTCGA GCGCGACGCC
CAGCGCCGGG TGAATATCCG CGTCACCGAC GAGATCGTCA CCGCATTGAA CGAGCGCCGG
ATCGTGCTGG CCTACGAGCC GGTGGTCGAC GTCGCGACCC GTGCGCCGGC GTTTCACGAA
TGCCTGGTCC GGATGCGGCA GAACGACGGC CAGGTGCTGC TGGCGCCCGA CATCGTGCCG
GTCGCGGAGC GGCTCGGCCT GATCCGGCTG GTCGATCATC GCGTGCTCGA ACTCGTCGTC
GCCGAACTCG CCGCCGCGCC GCAGATGACG CTCAGCCTCA ACATCTCACC CGACACCACG
ATGGACGCCG ACTGGTGGGC CGGGATCGAA TCGCTAATGC TGGCGCACCC CGGCGTCGCC
GAACGGCTGA TCGTCGAGAT CACCGAGACG GTCGCGATCC AGGACATCGA GGAGGTGCGC
GGTTTCGTCA CGCGGCTGAA AAAATTCGGC GCGAAAATCG CGATCGACGA TTTCGGCGCC
GGCTACACCT CGTTCCGCAA CCTGCGCAAT CTCGGCGTCG ATATCGTGAA GATCGACGGC
GCCTTCGTGC AGAACATCGC GCGCTCGGCC GACGACCGCG CCTTCGTCCA GACCCTGATC
GATCTGGCGC GCAGGCTCGG TATCAAGACG GTGGCGGAAT GGGTTCAGGA CGACGAGTCG
GCGCTGATGC TGCGCGACTG GGGTTGCGAT TACATCCAGG GCCGGCTGAT CGGGCTGGCG
TCGCAGCACC GCCCATGGGA CGGGCCGACC GCGGCGGAGA CCGCCGCGGT GCGGGAGCGC
GCGGCGAACT AA
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| Protein sequence | MSPVDPTAAQ PIAPTESRGP DPAEILAALG QAAFVWELAT DALVWTGPAA GLFQDIPAGT
LATGAGYASL LEPSRAIRAD ALLNASAAAG AHCVPYRIEY GVRAATSAPI IWIEESGRWH
PGPDGRPARV EGIVRVNNER HARDQQLLKL SQNDPLTGEL NRTNLVAALA EAIEEASRFR
NSLCFMLIGI DHLSRINDSF GFDVADEVIY TLSQRIRARL RAGDELGRFS GNKFGVVLKA
CTIDDAHVAA ERFLAAIRDE IVPTRSGPVS ITASIGAVSS PRHARTAEEA INRAQEALAA
AKHRRCGAFS MWRPNVERDA QRRVNIRVTD EIVTALNERR IVLAYEPVVD VATRAPAFHE
CLVRMRQNDG QVLLAPDIVP VAERLGLIRL VDHRVLELVV AELAAAPQMT LSLNISPDTT
MDADWWAGIE SLMLAHPGVA ERLIVEITET VAIQDIEEVR GFVTRLKKFG AKIAIDDFGA
GYTSFRNLRN LGVDIVKIDG AFVQNIARSA DDRAFVQTLI DLARRLGIKT VAEWVQDDES
ALMLRDWGCD YIQGRLIGLA SQHRPWDGPT AAETAAVRER AAN
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