| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0505 |
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| Symbol | |
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| ID | 3909409 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 565325 |
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| End bp | 567937 |
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| Gene Length | 2613 bp |
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| Protein Length | 870 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637882393 |
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| Product | ATP-dependent helicase HrpB |
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| Protein accession | YP_484127 |
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| Protein GI | 86747631 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01970] ATP-dependent helicase HrpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.967773 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCCTTGC CCCGATCCTT CGACACGCCA CTTCCGATCG ACGACGCGCT CAGCGATCTC
GCCGCCGCGC TCGCTGCGAA CAGCACGGCG GTGCTGGTAG CGCCGCCCGG CGCTGGCAAG
ACCACGCGGG TGCCGCTGGC GCTGCTCGAT GCGCCGTGGC TGAAGGGCCA GAAGATCATC
GTGCTGGAGC CGCGCCGGAT CGCGGCCCGC GCCAGCGCCG AGCGGATGGC CAGGACGCTG
GGCGAGCGCG CCGGCGACAC CGTCGGCTAC CGGGTCCGGT TCGGCTCCAA AGTGTCGCGC
GCGACGCGGA TCGAGGTCGT CACCGAGGGC ATCTTCACCC GGCAGATCCT GGACGATCCG
GAACTGACCG GCATCGGCGC GGTGCTGTTC GACGAATTTC ACGAGCGCTC GCTCGATGCC
GATCTCGGTC TGGCGCTGGC GCGCGACGCC CAGCAGGGGC TGCGCGAGGA TCTGCGCATT
CTGGTGATGT CGGCGACGAT CGACGGCGCC CGGGTGGGCA AGCTGCTCGG CGATGCCCCG
GTGGTCGAAA GCCTCGGCCG GGCGTTTCCG GTCGAGACCC GCTATCTCGG CCGCCGTTCC
GACGCGCCGA TGGAGCGGCA GATGGCGGAA GCGATCGCCG CGGCGCTGCG CAGCGATTCA
GGCTCGGTGC TGGCGTTCCT GCCGGGCGCC GCCGAAATCC GCCGCACCGA GACGATGCTG
CGCGAGCGCG TCCAAGACGC GTCGATCGAG ATCGTGCCGC TGTTCGGCGC GCTCGATGCC
GCCGTGCAGG ACCGCGCCAT CCAGCCGGCG CCCAAGGGGA GCCGCAAGGT GGTGCTGGCG
ACCTCGATCG CCGAGACCTC GCTGACGATC GAGGGCGTCC GCATCGTGGT CGATTGCGGA
TTGTCGCGGG TGCCGCGCTA CGAGCCGGAT ATCGGGCTGA CGCGGCTCGA GACGGTGCGG
GCCTCGCGCG CCGCGGTCGA TCAGCGCCGC GGCCGCGCCG GCCGCATCGA GCCCGGAATC
TGCTACCGGC TGTGGGACGA GCCGCAGACC GCCTCATTGC CGGCCTACAC CCAGCCGGAG
ATTCTCAGCG CCGATCTCAC CTCGCTGCTG CTCGATCTGG CGCAATGGGG CGTGAGTGAT
CCGGCCACGT TGGCGTTTCT CGATCCGCCG CCGGCCCCGG CGCTGAAGGA AGCGCGCGAG
CTGCTGCGCG AACTCGGCGC GCTCGATGCC GATGGCCGCA TCACCGACGA GGGCCGGTCG
TTGCGTGCAA TGGCGCTGCC GCCGCGGCTG GCGCGGATGA TCGTCGATGC GGCGCGGCTC
GATCATGGCG AGGAGGCCGC CGAGATCGCC GCGATCCTCA CCGAGCGCGG CCTCGGCGGC
GACAGCGTCG ATCTCGATCA TCGCCGCGAC CAGTTCCGCC GCGACCGCTC GCAGCGCGCG
ACGAGTGCGC GACAGATGGC GGAGAGATGG GCCTCTTCAC CCTCCCCCTC GCGGGGAGGG
TGGACGGCCG AAGGCCGGCC GGGTGGGGGG AGCCACGAGC GCGGTGCCCG CGGCACCCCC
ACCCCCAACC CCTCCCCGCA AGGGGGAGGG GAGTCGCGCC GCGGGTCGGG GCAGCGGACT
GCCCAACAGG CAGATGGCGA TCAGTTCTTG TCGACCGGCG TCCTCCTGTC CTTCGCCTTC
CCCGATCGCG TCGCCAAGAA CCGCGGCAAT GGCTCGTTCG TGCTCGCCAA TGGCCGCGGC
GCGATGATCG AGCAGACTTC GGCGTTGGCG CGGGCGCCGT ATCTGGCGGT GGCGGAATTG
ACCGGCACGG CGGCGCAGGG GCGCATCCTG CTGGCGGCGC CGATTTCGCT GGCCGAGATC
GAGCAGCATT TCGCCGAGCA GATCACCGAC GCCGACGAGG TCTCGTTCGA TCGCGCCGCG
ATGGCGCTGC GGGCGCGGCG GCGGCGGGTG CTGCATGCGA TCACGCTGTC GGAGGCGCCG
CGGGCGCTGA CGCCGTCGGC CGAGACCGCG CGGGTGCTGG CCGAGGGGCT GGTCGCGGCC
GGGCTGGAGC GGCTGCCCTG GTCGAAATCG CTCGAACAAT GGCGCGGCCG GGTGATGTTC
TTGCGCAAGG CCGAGGGCGA GCCCTGGCCG GACCTCTCGG ACGCAGCACT CGCCGAGCAG
CGCGAGCAGT GGCTGGTGCC GGCGCTGTTC GACAAGATCG GGCTGAAGGA GTTCTCCGCC
GGCGATCTGT CCGACGCGCT GATGAACCTG CTGCCATGGG ATTTGCGGGC GCGGCTGGAG
CGCGAGGCGC CCACCCATTT CGAGGCGCCG ACCGGCTCGC GCCTGCCGAT CGACTACGCC
GCCGAGCAGG GCCCGACCAT CGCGGTCAGG CTGCAGGAAT TGTTCGGGTT GACGACACAT
CCGTCCGTCG CCGGCGGCAA GGTGCCGCTG GTGCTGGAAT TGCTGTCGCC GGCGCACCGC
CCGGTGCAGG TGACGCGCGA CCTGCCGGGA TTTTGGCGCG GCTCCTACGC CGCGGTGCGC
GCCGATCTGC GCGGCCGCTA TCCGCGCCAC CCCTGGCCGG AAGATCCGGC GGGCGCGCCG
CCGACCCGCC GCGCCAAGCC GAAAGGCACA TAA
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| Protein sequence | MPLPRSFDTP LPIDDALSDL AAALAANSTA VLVAPPGAGK TTRVPLALLD APWLKGQKII
VLEPRRIAAR ASAERMARTL GERAGDTVGY RVRFGSKVSR ATRIEVVTEG IFTRQILDDP
ELTGIGAVLF DEFHERSLDA DLGLALARDA QQGLREDLRI LVMSATIDGA RVGKLLGDAP
VVESLGRAFP VETRYLGRRS DAPMERQMAE AIAAALRSDS GSVLAFLPGA AEIRRTETML
RERVQDASIE IVPLFGALDA AVQDRAIQPA PKGSRKVVLA TSIAETSLTI EGVRIVVDCG
LSRVPRYEPD IGLTRLETVR ASRAAVDQRR GRAGRIEPGI CYRLWDEPQT ASLPAYTQPE
ILSADLTSLL LDLAQWGVSD PATLAFLDPP PAPALKEARE LLRELGALDA DGRITDEGRS
LRAMALPPRL ARMIVDAARL DHGEEAAEIA AILTERGLGG DSVDLDHRRD QFRRDRSQRA
TSARQMAERW ASSPSPSRGG WTAEGRPGGG SHERGARGTP TPNPSPQGGG ESRRGSGQRT
AQQADGDQFL STGVLLSFAF PDRVAKNRGN GSFVLANGRG AMIEQTSALA RAPYLAVAEL
TGTAAQGRIL LAAPISLAEI EQHFAEQITD ADEVSFDRAA MALRARRRRV LHAITLSEAP
RALTPSAETA RVLAEGLVAA GLERLPWSKS LEQWRGRVMF LRKAEGEPWP DLSDAALAEQ
REQWLVPALF DKIGLKEFSA GDLSDALMNL LPWDLRARLE REAPTHFEAP TGSRLPIDYA
AEQGPTIAVR LQELFGLTTH PSVAGGKVPL VLELLSPAHR PVQVTRDLPG FWRGSYAAVR
ADLRGRYPRH PWPEDPAGAP PTRRAKPKGT
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