| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0502 |
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| Symbol | |
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| ID | 3909406 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 560323 |
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| End bp | 561774 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637882390 |
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| Product | putative Omp2b porin |
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| Protein accession | YP_484124 |
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| Protein GI | 86747628 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0711534 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.785623 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAGTGA TCAAACGACT GGCGCTGGGC ACGGCGGCGG CATTGTTGAC TGCCGGCGTC
GCGCAGGCGG CCGATCTTCC GATGAAGGCC AAGGCCGTCG AGTACGTCAA GGTCTGCTCG
ATCTACGGCG CCGGCTTCTA CTACATCCCC GGCACCGACA CCTGCATCAA GCTCGGCGGC
TATCTGCGCG CCGACGCCAC GTTCGGTGGC TCGGGTGCTT ATGACTCCCC GGCCTGGAGC
GGCACCTCCG GCGCCAAGAG CCGCAACGCC AACAGCTATG TGTTCCGTTC GCGTCAGGAC
ATCAACATCG ACACCCGCAC CGCGACCGAA TACGGCGTGG TCCGCACCTA TTTCGACGCG
ACCTTCAACT GGACCACGGG CTCCGATTCC ACGGCCGGCG GCACGCTCGG CGTGTATTTC
GCCTTCATCC AGTTCGCCGG CTTCACCTTC GGCAAGGCGG TGTCGCAGTT CGATACGCCA
TGGTCGGGCT ACCCGGGCAA CAACACCTCG TTCCTGATCG GCGGCTATGA CGACGTCACC
GGCATCAACC AGGTCGCCTA CACCGCCGAA TTCGGCAACG GCGTCTCGGC CTCGATCTCG
CTCGAAGATG CGTCGTCCTA CAATCAATCG GCGCTGTACA ACACATCGAC CATGACGGCG
GCCAATTTCG CCACCGGCGT CTACGGCACC AACTCCTACG CCGGCTCGCA GATCCCCGAC
ATCGTCGGCA AGATCCGCGT CGACCAGGCC TGGGGCCTGT TCCAGGTGTC GGCCGCGGCT
CACCAGGTTC GCGCCAGCTA CTACAACACC GCCCTCGAGA CCTCGGGTCA TCCGAGCGAT
ACCTGGGGCT ACGCGGTGCA GGGCGCAATT TCGCTGAAGA ACCTGCCGAC CGGTCCCGGC
GACAGCATCA ACTTCACCGC GACCTACTCG AACGGCGCCA CCCGCTACGT GATCGGCGGT
TCGTCTCCGA ACTCGTTCGC GATGTACGGC AGCTCCAGCT CGGCCTACCA GAGCCTCGCG
ATCGCGGGCG TGGCTGATGG TGTGTTCTCC GGCACCGACG TCAGCAACGG CAGCGGCATC
TCCAAGACCA CCGCATGGGG CGTCCGTGGC GCGTTCAACC ACAACTGGAA TCCCTACTGG
TCGACCTCGC TGTTCGGTTC GTACACCTCG ATCGACTACA ACGGCACCGC GACGGCCCAG
ATCTGCGCCA CGGCTGTCGG CTTCACCTGC AACCCGGACT TCAAGATCGC TCAGATCGGC
ACCGTCACCC GTTGGACCCC GGTCAAGAAC CTGACGTTCT CGGGCGAAGT GATGTACACC
TATCTCGACC AGAGCTACTC CGGCAACGTC GCCCTTCCGG CGGTGTCGTC GGTGTCCAAG
CCGGCCGCGA CCTACGAGCT CAAGGACCAG GGCGCCTGGA GCGGCAACCT CCGGGTTCAG
CGCACCTTCT GA
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| Protein sequence | MRVIKRLALG TAAALLTAGV AQAADLPMKA KAVEYVKVCS IYGAGFYYIP GTDTCIKLGG
YLRADATFGG SGAYDSPAWS GTSGAKSRNA NSYVFRSRQD INIDTRTATE YGVVRTYFDA
TFNWTTGSDS TAGGTLGVYF AFIQFAGFTF GKAVSQFDTP WSGYPGNNTS FLIGGYDDVT
GINQVAYTAE FGNGVSASIS LEDASSYNQS ALYNTSTMTA ANFATGVYGT NSYAGSQIPD
IVGKIRVDQA WGLFQVSAAA HQVRASYYNT ALETSGHPSD TWGYAVQGAI SLKNLPTGPG
DSINFTATYS NGATRYVIGG SSPNSFAMYG SSSSAYQSLA IAGVADGVFS GTDVSNGSGI
SKTTAWGVRG AFNHNWNPYW STSLFGSYTS IDYNGTATAQ ICATAVGFTC NPDFKIAQIG
TVTRWTPVKN LTFSGEVMYT YLDQSYSGNV ALPAVSSVSK PAATYELKDQ GAWSGNLRVQ
RTF
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