Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0500 |
Symbol | |
ID | 3909404 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 558477 |
End bp | 559358 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637882388 |
Product | hypothetical protein |
Protein accession | YP_484122 |
Protein GI | 86747626 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.754086 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGCGG AATTTGGAGA TCGTCGGTTG GTAGTTGCGC CCGAAATGAG GCGTCCGTTG CGGGATGTGT CCGATCCCGG CGCGGGTTTC GCTGCGAAGC TCGATTCGTC GGATCAGTTT GGCGGCGGTC GCGGATCGGG AGAGGAGCTC GCGCCCCAAC GAGGCCGGAT CGACACGCTC TCGCCGCAGG CAGACATCGT TTCGATTCCG TGGCGCGAAG GACATGCGAT CGAAGGCTGC TTCGTCGCCT CCGGCGCACC GGCATCGGAC GACGTTCCGG TCATTCTCTG CGTCGGCGAA TCCCGGCTCA GCAAAGAGCA ACTACTCGCG GCGTTTGCGC AGTCGGCGCA CGAGTCCGGG ATGAGCCTGC TCGGCATCGA TCTTCCCGCT CCGATACGCA GTCTGGAAGC AGAGCCGCCT GCGACGCCCG AGACGGCGAT CGTCGCAGCC ATCGACTACC TGCACGAGAG AGCCGGCGTC GATGCCGAGC GGATCGCCGT CGTGGCGGAC GGATCGCCGT CATCCATGGT GGCCAGAGGC GTTGCGCTCG ATGGCCGGGT GGCGGCGGCG GTTTGCGATG CCGGAGTCTG GCAGTTGTGG GAGCACGACC AGATCTGCGG GCTTGAAGCT GCCGGCAGTA TCGAGCCTCT CGCGGTCCGC GCGCTCCGGT GTCCGACGCT GATGCTGATC CGGTCCAACG ACGGCATCGA TCCGGAGCAT GTCAGGCAAT TGCTGGCGCG GTCGGGGACG CGCGATGTCG ATCTACGGGA ATTCGCACCG TCCGGGCCGG ATCGGACCGA GCCGCTGGCG TCGGCCGCCG AGATCGTCGT TCAGTGGTTG ACCGAGCAAT TGCAAGGCCG AGCGCCCGCC AGTCCGGTCT AG
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Protein sequence | MAAEFGDRRL VVAPEMRRPL RDVSDPGAGF AAKLDSSDQF GGGRGSGEEL APQRGRIDTL SPQADIVSIP WREGHAIEGC FVASGAPASD DVPVILCVGE SRLSKEQLLA AFAQSAHESG MSLLGIDLPA PIRSLEAEPP ATPETAIVAA IDYLHERAGV DAERIAVVAD GSPSSMVARG VALDGRVAAA VCDAGVWQLW EHDQICGLEA AGSIEPLAVR ALRCPTLMLI RSNDGIDPEH VRQLLARSGT RDVDLREFAP SGPDRTEPLA SAAEIVVQWL TEQLQGRAPA SPV
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