Gene RPB_0500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0500 
Symbol 
ID3909404 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp558477 
End bp559358 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content66% 
IMG OID637882388 
Producthypothetical protein 
Protein accessionYP_484122 
Protein GI86747626 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.754086 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGCGG AATTTGGAGA TCGTCGGTTG GTAGTTGCGC CCGAAATGAG GCGTCCGTTG 
CGGGATGTGT CCGATCCCGG CGCGGGTTTC GCTGCGAAGC TCGATTCGTC GGATCAGTTT
GGCGGCGGTC GCGGATCGGG AGAGGAGCTC GCGCCCCAAC GAGGCCGGAT CGACACGCTC
TCGCCGCAGG CAGACATCGT TTCGATTCCG TGGCGCGAAG GACATGCGAT CGAAGGCTGC
TTCGTCGCCT CCGGCGCACC GGCATCGGAC GACGTTCCGG TCATTCTCTG CGTCGGCGAA
TCCCGGCTCA GCAAAGAGCA ACTACTCGCG GCGTTTGCGC AGTCGGCGCA CGAGTCCGGG
ATGAGCCTGC TCGGCATCGA TCTTCCCGCT CCGATACGCA GTCTGGAAGC AGAGCCGCCT
GCGACGCCCG AGACGGCGAT CGTCGCAGCC ATCGACTACC TGCACGAGAG AGCCGGCGTC
GATGCCGAGC GGATCGCCGT CGTGGCGGAC GGATCGCCGT CATCCATGGT GGCCAGAGGC
GTTGCGCTCG ATGGCCGGGT GGCGGCGGCG GTTTGCGATG CCGGAGTCTG GCAGTTGTGG
GAGCACGACC AGATCTGCGG GCTTGAAGCT GCCGGCAGTA TCGAGCCTCT CGCGGTCCGC
GCGCTCCGGT GTCCGACGCT GATGCTGATC CGGTCCAACG ACGGCATCGA TCCGGAGCAT
GTCAGGCAAT TGCTGGCGCG GTCGGGGACG CGCGATGTCG ATCTACGGGA ATTCGCACCG
TCCGGGCCGG ATCGGACCGA GCCGCTGGCG TCGGCCGCCG AGATCGTCGT TCAGTGGTTG
ACCGAGCAAT TGCAAGGCCG AGCGCCCGCC AGTCCGGTCT AG
 
Protein sequence
MAAEFGDRRL VVAPEMRRPL RDVSDPGAGF AAKLDSSDQF GGGRGSGEEL APQRGRIDTL 
SPQADIVSIP WREGHAIEGC FVASGAPASD DVPVILCVGE SRLSKEQLLA AFAQSAHESG
MSLLGIDLPA PIRSLEAEPP ATPETAIVAA IDYLHERAGV DAERIAVVAD GSPSSMVARG
VALDGRVAAA VCDAGVWQLW EHDQICGLEA AGSIEPLAVR ALRCPTLMLI RSNDGIDPEH
VRQLLARSGT RDVDLREFAP SGPDRTEPLA SAAEIVVQWL TEQLQGRAPA SPV