| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0486 |
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| Symbol | |
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| ID | 3909831 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 544592 |
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| End bp | 545179 |
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| Gene Length | 588 bp |
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| Protein Length | 195 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637882373 |
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| Product | RNA polymerase sigma factor RpoE |
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| Protein accession | YP_484108 |
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| Protein GI | 86747612 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02985] RNA polymerase sigma-70 factor, Bacteroides expansion family 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.200751 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATCATC CGCGACGCAA GCCGCCTGCC GTTTCGCAGG ATTTGTCCGA CTGCATCGTT
CGGATCGCCA CCGATCACGA CGAGGCCGCG TTCGACGTGT TGTTCAGGCA CTATGCGCCG
CGGCTGAAAT CCTACTTCAC CAGGCGCGGC GGCGATCCGG CGATGGCGGA GGAGATCACC
CAGGAGACCA TGGTCTCGGT CTGGAAGAAC GCCGCGCAGT TCGACCCGGC CAAGGCCTCG
GCGACGACCT GGATCTTCAC CATCGCCCGC AATCTCGGCA TCGACCGGCT GCGGCGGGCG
AAGCGGCCGT CGTTCGACCC GCACGATCCG GCGTTCGTTC CCGACGAGGA GGACCCGCCG
GACCGCCAGT TCGAGCGCGC CGAAGCGCAG CGCCGGGTGC GCGACGTGAT GAATACGCTG
TCGTCCAACG AGAAGAGCGT TCTGATGTTG TCGTTCTACG AAAATCAATC GCACGGCGAG
ATCGCCCAAC GGCTCGGCCT GCCGGTCGGG ACGGTGAAGT CGCGGATCCG GCTGGCGTTC
GGCAAGCTGC GCGCCGCGCT CGAGCCGCTG ACGGGAGCCG GACGATGA
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| Protein sequence | MDHPRRKPPA VSQDLSDCIV RIATDHDEAA FDVLFRHYAP RLKSYFTRRG GDPAMAEEIT
QETMVSVWKN AAQFDPAKAS ATTWIFTIAR NLGIDRLRRA KRPSFDPHDP AFVPDEEDPP
DRQFERAEAQ RRVRDVMNTL SSNEKSVLML SFYENQSHGE IAQRLGLPVG TVKSRIRLAF
GKLRAALEPL TGAGR
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