Gene RPB_0481 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0481 
Symbol 
ID3909826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp528992 
End bp529975 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content70% 
IMG OID637882368 
Productputative FecR 
Protein accessionYP_484103 
Protein GI86747607 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.133336 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCAAT TCGACGACCC CCCGGAGCAA TTGGGCGCGC TGCGCCGCGA AGCGCTGGAG 
CGCGTGCGCC GGCTCGGCTC CGGACGCGCC ACACCCGCGG ATGTCGAGGC CACCAAGCAG
TGGGGCCGCC AGAGCCCGGA TCACGCCGAG GCGCTGTGGC AGGCGAGCCT GCTCTGGGAC
CGGCTGGGCT GCGCTGGAGA CAACGTGCTG CGACGCTCGG GTGCAGCTTT GGGGGGCGTG
CAAGCGGCGG CGCCCGCACC GAGCCGCCGC GCGTTCGTCG CCGGCGCCGC TGCGACCGCA
GCCGCGGCCT ATCTCGTCGT TCGTCCGCCG CTCGATCTGT GGCCCTCGCT CGGCGATGTG
ATGGCCGACT ACCATACCGC CACCGGCGAA ACCAAAGACG TCAGCATCCC GGGCGATATC
CGGCTGTCGC TCAACACGGC CACCAGCATC AAGCTGCAGA AGCCGGCGGA TACGATCGAG
CGGATCGAAC TCCTCAGGGG AGAGGCCACC GTCACGGTCG GGGCGCAGCC GGGCCGCGAG
CTGATCATCG TGGCCGGTGC CGGAGAGGCG AGAGCCCGCC ACGCGCAGTT CAACGTCCTG
CACGAGCAGG ACGCGACCTG CGTCACCTGC CTTCAGGGCG AGGTGGAGGT GCGCCTCGGC
ACCGCCTCGT CGGTGCTGAG GCTGGGGCAG CAGCTCCGCT ACGGCGCCGA TGGGCTAGGA
TCGGCGACGC CGGCGGATAT CGGGGAGGTG ACGGCCTGGC GCGAAGGCCT GCTGATCTTC
CACCAGCGGC CGCTGATGGA TGTCGTCGCT GAGATCAATC GATACCGACC GGGCCGGGTG
ATGGTGGTCA ATGCCGAACT CGGCCGGCGC GTTGTCAACG GCCGCTTCCG CGTCGACAAT
GTCGATGGCG TTATGGCGAT GTTCGAACAG ATCTTCGGCG CCAAGCTGAC GCGGCTGCCG
GGCGGCATCG TGCTGCTGGG CTGA
 
Protein sequence
MMQFDDPPEQ LGALRREALE RVRRLGSGRA TPADVEATKQ WGRQSPDHAE ALWQASLLWD 
RLGCAGDNVL RRSGAALGGV QAAAPAPSRR AFVAGAAATA AAAYLVVRPP LDLWPSLGDV
MADYHTATGE TKDVSIPGDI RLSLNTATSI KLQKPADTIE RIELLRGEAT VTVGAQPGRE
LIIVAGAGEA RARHAQFNVL HEQDATCVTC LQGEVEVRLG TASSVLRLGQ QLRYGADGLG
SATPADIGEV TAWREGLLIF HQRPLMDVVA EINRYRPGRV MVVNAELGRR VVNGRFRVDN
VDGVMAMFEQ IFGAKLTRLP GGIVLLG