| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0480 |
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| Symbol | |
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| ID | 3909825 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 528382 |
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| End bp | 528930 |
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| Gene Length | 549 bp |
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| Protein Length | 182 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637882367 |
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| Product | sigma-24 (FecI-like) |
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| Protein accession | YP_484102 |
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| Protein GI | 86747606 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0637094 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTGAGG CGAGCTGGAC CGTGCTCCGC GAGGTGCTGG CGGAGCGCTA TGACGAATTG
TGCCGGCGGC TCGCTGTCCG TCTCGGTTCG AAAGAAGCCG CGCGCGAGAC CCTGCACGAA
ACCTGGTTGC ATCTGCGCAG CGGCAACGAT CCGGTCGAGG TTCAGCGTCC GTTCGGCTAT
CTGCTGCGCA CCGCCTTGAA CCTCGCGATC AGCCGCGAGC GCACCGAGCA ACGCCGCAAC
AAGCAGCTCG ATGTGGTGGA CATGCTCGAA CTGGTCGATC CGGCGCCGGG TCCCGAGCGC
GAGGCCGAGG CGCGGCGGCA GGTCGAGTTT CTCGAACAGG TACTGCAAGA GCTGCCGCCG
CGGCGCCGCG CCATCCTGCT GGCATCCCGC GTCGAGGGCG TGCCGCTGAA GCGCATCGCC
GAGCATCTCG GTCTATCGCA GCGCTTCGTC GAGATGGAAT TGAAGGCGGC GCTGGAATAT
TGCGCCCGGC GGTTCGGCAA AAAGCTCACG CGGCGGTTCG GTCCGCGGTC GAAAGAAGCG
TCTTCATGA
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| Protein sequence | MTEASWTVLR EVLAERYDEL CRRLAVRLGS KEAARETLHE TWLHLRSGND PVEVQRPFGY
LLRTALNLAI SRERTEQRRN KQLDVVDMLE LVDPAPGPER EAEARRQVEF LEQVLQELPP
RRRAILLASR VEGVPLKRIA EHLGLSQRFV EMELKAALEY CARRFGKKLT RRFGPRSKEA
SS
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