| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0471 |
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| Symbol | |
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| ID | 3909816 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 519284 |
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| End bp | 519703 |
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| Gene Length | 420 bp |
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| Protein Length | 139 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637882358 |
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| Product | putative patch repair protein |
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| Protein accession | YP_484093 |
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| Protein GI | 86747597 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3727] DNA G:T-mismatch repair endonuclease |
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| TIGRFAM ID | [TIGR00632] DNA mismatch endonuclease Vsr |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.797287 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTTCGA CCGCCTGCGA GACGCCGGTC GACCCCGCGC GGTCGGCCTT GATGCGCCGG
GTTCGGCAGA AGCGCACGAG GGCGGAGGAC GACGTCGCCG ACGTGCTGCG TGAACTGGGC
TTGCGCTTCC GACGCAACGT GAGAACGCTG CCGGGCTCCC CCGATTTCGC CAACAAGACC
CACCATTGGG CGATATTCGT CAACGGCTGC TTCTGGCATC GTCACCAGGG ATGCCACCGA
ACCACCACGC CGACGCGCAA TCGGGAGTTC TGGCTGGCGA AGTTCGCGGC CAACGTGAAG
CGAGACAAGA TCAAGACGCG CCTTCTGCGT GCGATGGGGT TCAGGGTGGT GACGATCTGG
GAATGCGAGA CGCGCACGCC GACCAAGGTG CGACGTCGGC TGAAAGGGCT GATGAGGTAG
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| Protein sequence | MSSTACETPV DPARSALMRR VRQKRTRAED DVADVLRELG LRFRRNVRTL PGSPDFANKT
HHWAIFVNGC FWHRHQGCHR TTTPTRNREF WLAKFAANVK RDKIKTRLLR AMGFRVVTIW
ECETRTPTKV RRRLKGLMR
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