Gene RPB_0465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0465 
Symbol 
ID3909810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp513420 
End bp513947 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content71% 
IMG OID637882352 
ProductHPr kinase 
Protein accessionYP_484087 
Protein GI86747591 
COG category[T] Signal transduction mechanisms 
COG ID[COG1493] Serine kinase of the HPr protein, regulates carbohydrate metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.840356 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.150084 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCGC CGGGCGCGCC CAGCATTCAC GCCTCCGCCG TCCGGGTCGG CGACCGCGCG 
GTGCTGATCC GCGGGCCCTC CGGCTCCGGT AAATCCCGCC TCGCCTTCGG GCTGATCGTC
GCAGGACGGG CGGGGCAGAT CCCGCCGGTG GAACTGATCG GCGACGATCG GGTCTTTCTG
GAACAGCGCG ACGGCCGGCT GCGGGTCCGC CCGGTGCCGG GTCTCGCGGG GATGATCGAG
GTCCGGGGCC TCGGCCTCCG CCGGGTTCCG GCCGCCCCGG AGGCGGTCGT CGGCCTGGTC
GTCGACCTCG CCGCGGAGGA CGCCGCCCGC CTTCCCGAAG CGGCCGCGTT GCGTATGATG
CTGGAGGGCG TCGAATTGCC GCGGGTGCCG GTCGGTCCCG GCTATGATCC GCTACCACTG
GTCGTCGCGG CGCTGACGAC CGGCGACGCC ATCGCACCTG GGACACAGTT GGATGATTGC
CGGAAGGATT TTGGTAACCA TATGAGCCAC ACAATCGTCA CTGAATAG
 
Protein sequence
MTAPGAPSIH ASAVRVGDRA VLIRGPSGSG KSRLAFGLIV AGRAGQIPPV ELIGDDRVFL 
EQRDGRLRVR PVPGLAGMIE VRGLGLRRVP AAPEAVVGLV VDLAAEDAAR LPEAAALRMM
LEGVELPRVP VGPGYDPLPL VVAALTTGDA IAPGTQLDDC RKDFGNHMSH TIVTE