| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0463 |
|---|
| Symbol | |
|---|
| ID | 3909808 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | + |
|---|
| Start bp | 510770 |
|---|
| End bp | 511471 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637882350 |
|---|
| Product | two component transcriptional regulator |
|---|
| Protein accession | YP_484085 |
|---|
| Protein GI | 86747589 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.966783 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.711351 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAACAA TCGCCTTGGT CGACGACGAC CGCAACATCC TCACATCCGT CTCGATCGCT
CTGGAAGCCG AGGGCTACCG GATCATGACC TATACGGATG GCGCTTCCGC GCTCGACGGA
TTCCGCACCT CGCCGCCCGA CCTCGCCATC CTCGATATCA AGATGCCGCG GATGGACGGC
ATGGAAACGC TGCGGCGGCT GCGGCAGAAG TCCGACCTGC CGGTGATCTT CCTCACCTCC
AAGGACGAGG AGATCGACGA ATTGTTCGGC CTCAAGATGG GCGCCGACGA TTTCATCCGC
AAACCGTTCT CGCAGCGTCT GCTGGTCGAG CGCGTCAAAG CGGTGCTGCG GCGCTCGGCG
CCGAAGGATC CGGCTGCTGC GCCGAAGGAA ACCGACGCCA AGGCGCTGGA CCGCGGCCTG
CTGCGGATGG ACCCGGAGCG TCACACCTGC ACCTGGAAGA ACGAGCCGGT GACGCTCACC
GTCACCGAAT TCCTGATCCT GCAGGCGCTG GCGACCCGGC CCGGCGTGGT GAAAAGCCGC
AACGCGCTGA TGGACGCCGC CTATGACGAT CAGGTCTATG TCGACGACCG CACCATCGAC
AGCCACATCA AGCGGCTGCG CAAGAAGTTC AAGGTGGTGG ACGACGATTT CGAGATGATC
GAAACCCTCT ACGGTGTCGG CTACCGCTTC AAGGAAACCT GA
|
|---|
| Protein sequence | MPTIALVDDD RNILTSVSIA LEAEGYRIMT YTDGASALDG FRTSPPDLAI LDIKMPRMDG
METLRRLRQK SDLPVIFLTS KDEEIDELFG LKMGADDFIR KPFSQRLLVE RVKAVLRRSA
PKDPAAAPKE TDAKALDRGL LRMDPERHTC TWKNEPVTLT VTEFLILQAL ATRPGVVKSR
NALMDAAYDD QVYVDDRTID SHIKRLRKKF KVVDDDFEMI ETLYGVGYRF KET
|
|---|
| |