| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0454 |
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| Symbol | |
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| ID | 3909799 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 500831 |
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| End bp | 501805 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637882341 |
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| Product | pseudouridine synthase RluD |
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| Protein accession | YP_484076 |
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| Protein GI | 86747580 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.256268 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTCGTCG CCGGCGACGA GGGCTCATCG CGCCTCGACC GGGTGCTGGC CACGCGCTGC
CCCGCATTGT CGCGGTCGCG GCTGAAGGTC CTGATCCTGG ACGGCCGCGT CGCGATCGCC
GGCAGCGCGG TGCGCGACCC CGCTTATCAT GCGAGCCCGG GCGAGACGAT CACAATCGAC
GTGCCGCCCC CGGTGGCGCC GGAGCCGGAA GGCGAGGCGA TCGCGCTGGA GATTGTGCAC
GAGGACGACG ACATCATCGT CATCAACAAG CCCCGCGGCC TGGTGGTGCA TCCCGCCGCC
GGTCACGAGA CCGGAACCCT GGTCAACGCT TTGATCGCGC ATTGCGGCGA ATCACTGTCC
GGCATCGGCG GGGTGCGGCG GCCGGGGATC GTGCACCGGC TCGACAAGGA CACCACCGGG
CTGATGGTGG CGGCAAAGAA TGATCGGGCG CATCAATCCT TGAGCGCGCA ATTCGCCGAT
CACGGCCGCA CCGGCGAGCT GCGCCGCGGC TATTACGCCT TCGTCTGGGG CGTGCCGAAC
CGCGCCCGCG GCACCATCGA GGCGCCGATC GACCGCCATC CCTATGCCCG CGAGAAGATG
GCGGTGCGCG ACGGCGGCCG CGAGGCGATC ACCCATTGGG AGGTGCTGGA AACCTTCACC
GGGCGCAGCG GCGGCGAGAT CGTGTCGCTG ATCGCCTGCC AGCTGGAGAC CGGCCGCACC
CACCAGATTC GCGTGCATCT GGCCCATCTC GGCCACCCGC TGCTCGGCGA CGACGTCTAC
GGACCGCACT TCAAAACCAA GGCCAGCCAG CTCAGCCCGG CCGCCCGCGC CGCGCTGGCG
GATCTCGGCC GTCAGGCATT GCATGCCTAT CTGCTGGTAT TAGAGCACCC GTCGTCGGGA
GAGGTCATGG CCTGGGAATC CGGCCTGCCG GCCGATCTGG CGCGCCTGAA AGCCGCGCTT
TCGGCGACGG AATGA
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| Protein sequence | MVVAGDEGSS RLDRVLATRC PALSRSRLKV LILDGRVAIA GSAVRDPAYH ASPGETITID
VPPPVAPEPE GEAIALEIVH EDDDIIVINK PRGLVVHPAA GHETGTLVNA LIAHCGESLS
GIGGVRRPGI VHRLDKDTTG LMVAAKNDRA HQSLSAQFAD HGRTGELRRG YYAFVWGVPN
RARGTIEAPI DRHPYAREKM AVRDGGREAI THWEVLETFT GRSGGEIVSL IACQLETGRT
HQIRVHLAHL GHPLLGDDVY GPHFKTKASQ LSPAARAALA DLGRQALHAY LLVLEHPSSG
EVMAWESGLP ADLARLKAAL SATE
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