| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0450 |
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| Symbol | |
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| ID | 3910006 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 495742 |
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| End bp | 496941 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637882336 |
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| Product | methionine gamma-lyase |
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| Protein accession | YP_484072 |
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| Protein GI | 86747576 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR01328] methionine gamma-lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.677515 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGATC TGTCCAACCG CCATCTCCCG AACAGTCTCG GCTTCGCAAC CCGCGCCATC
CACCATGGCT ACGACCCGCA GGCGCATCTC GGCAGCCTCA ACCCGCCGGT GTTCCTGACC
TCGACCTATG CGTTCGACAG CGCCGCCGAG GGCGCGGCGC GGTTCGCCGG CGAGGCCGAG
GGCTTCATCT ATGGCCGGGT CGGCAACCCC ACCGTCGCGG TGCTGGAGCG GCGGCTGGCC
GAGCTGGAAG GCGGCGAAGC GGCGCTCGCC ACCTCCTCGG GCGTCGGCGC GCTGACCGCT
TTGGTCTGGA CGCTGCTCGC CAGCGGCGAC GAGATCGTCG CCGACCAGAT GCTGTATGGC
TGCACCTTCG GCCTGTTCGA GCATCATCTG CCGCGCTTCG GCATCCGGGT GCGGTTCGCC
GACCTCACCG ATCCGGCCGG CCTGGAGGCG GCGCTGAGCC CGGCGACCAG GATGGTGTTC
ACCGAGACGC CGTCGAATCC GAACATGCGG GTGGTCGATA TCGCCGCCAT CGCGGCGATC
ACCCGCCGCG CCGGCGCGCT GTTCGTCGTC GACAACACCT ATTGCACGCC GTATCTGCAG
CGCCCGCTCG AACTCGGCGC CGATATCGTC ACCCATTCGG CGACCAAATA TCTCGGCGGC
CATGGCGATC TGCTGGCCGG CGCCGTGGTG GCGTCGCAGG AGATCATCGA CCGGCTGCGC
TTCACCGGCA TCAAGGAACT CAACGGCGCC TGCATCTCGG CGTTCGACGC CTTTCTGATC
CTGCGCGGGC TGAAGACGCT GACGCTGCGG ATGGACCGCC ACAGCGCCAC CGCCGCAAAA
CTCGCGCGCG ACCTCGAGGC CCATCCGGCG GTGGCGGCTG TGTACTATCC GGGCCTCGAC
AGCCATCCGC AGCACGCACT CGCGCAAAGG CAGATGCGCC AGATGGGCGG CATGATCGCG
CTGGAACTGA AAGGCGGACT ACCAGCCGGC CGCGCGCTGA TGGACAACGT GAAGATCGCG
ACCCGCGCGG TCAGCCTCGG CGACGCCGAA ACCCTGATCC AGCACCCCGC CAGCATGACG
CACGCCACCT ACGACCCCGA CGAACGCGCC CGGCACGGGT TCACCGACGG GCTGATCCGG
ATCTCGGTGG GGCTGGAGGA CTACGAGGAT TTGCGGGGGG ATCTGCTGGG GGCGTTGTGA
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| Protein sequence | MSDLSNRHLP NSLGFATRAI HHGYDPQAHL GSLNPPVFLT STYAFDSAAE GAARFAGEAE
GFIYGRVGNP TVAVLERRLA ELEGGEAALA TSSGVGALTA LVWTLLASGD EIVADQMLYG
CTFGLFEHHL PRFGIRVRFA DLTDPAGLEA ALSPATRMVF TETPSNPNMR VVDIAAIAAI
TRRAGALFVV DNTYCTPYLQ RPLELGADIV THSATKYLGG HGDLLAGAVV ASQEIIDRLR
FTGIKELNGA CISAFDAFLI LRGLKTLTLR MDRHSATAAK LARDLEAHPA VAAVYYPGLD
SHPQHALAQR QMRQMGGMIA LELKGGLPAG RALMDNVKIA TRAVSLGDAE TLIQHPASMT
HATYDPDERA RHGFTDGLIR ISVGLEDYED LRGDLLGAL
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