| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0440 |
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| Symbol | |
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| ID | 3909996 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 482994 |
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| End bp | 484511 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637882326 |
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| Product | peptidase S10, serine carboxypeptidase |
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| Protein accession | YP_484062 |
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| Protein GI | 86747566 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2939] Carboxypeptidase C (cathepsin A) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.480832 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGATGT CGCCCGGATT CGCCCGCCGC GTCGCGCTGG CGCTGATACT TCTCGCAACC
ACCGCAGCGC TCGCTCCGGC CCGTGCCCAG GACGCCTCGC CCCCGGCCAC CGCGCAAAGC
AAACCCGCGC CCGCCGACGC CGAGCAGCAC AAGCTGCCCG CCGATTCGAC GACCAGACAC
ACGCTGGCGC TGCCCGGCCG CAGCCTGTCC TTCACCGCCA CCGCCGGATC GATCCGGCTG
TTCAACGACA AGGGCGAGCC GCAGGCCGAT ATCGCCACCA CGGCCTATCA GCTCGACAAT
ACCGAGGCGC GGACGCGGCC GGTGACCTTC GTGTTCAACG GCGGGCCGGG CGCTTCCTCG
GCCTGGCTGC AGCTCGGCGC GGCGGGGCCG TGGCGGCTGC CGATGGCCGG CGACGCCGCA
GTCGCTTCGG CGACGCCGGC GCTGCAGCCG AATGCCGAGA CCTGGCTCGA CGTCACCGAC
CTCGTCTTCA TCGATCCGGT CGGCACCGGC TACAGCCGTT TCGTCGCCAG CGGCGACGAC
GTGCGCAAGC AGTTCTATTC GGTCGACGGC GATGTCGCCG CGATCGCGCT GGTGATCCGG
CGCTGGCTGG AGAAGCACGA CCGGCTGCTG TCGCCCAAAT ACGTCGCCGG CGAAAGCTAT
GGCGGCATTC GCGGCCCGCG CGTGGTGCGC AATCTGCAGA CCCGCCAAGG CATCGGCGTC
AAGGGGCTGA TCCTGGTGTC GCCCTTGCTC GACTTCCGCG AATACTCCGG ATCGAGCCTG
CTGCAATACG TCGCCAGGCT GCCGACCATG GCGGCGGCGG CGCGGCAGCG AAAGGGTCCG
GTCACCCGCG CCGATCTCGC CGACGTCGAG AGCTACGCGC GCGGCGAATT CATCACCGAT
CTGCTCAAGG GGCAGGCCGA CCAGGCCGCC ACCCAGCGCC TCGCCGATCG CGTCGCGGCC
TCGAGCGGGA TCGATCCCGC CGTCAGCCGC AGGCTCGCCG GCCGGCTCGA TACCAGCGAA
TTCCAGCGCG AGTTCGATCG GGCGAACGGC AAGGTCACCG GCCGGTTCGA CGCCTCGGTG
CTGGGCTTCG ATCCGTTTCC GGATTCCAGC GACGCGCAGT TCAGCGACCC GTCGTCGGAA
TCGCTGATCG CGCCGCTCAC CAGCGCCGCG ATGGAGCTGA CCCGCAACAT GCTGCAATGG
CGCCCGAGCG GCTCGTATCA TCTGCTCAAC GGCGCGGTGT CGCAGCAATG GGATTTCGGC
CGCGGCCGCA GCCCGGTCGA ATCGGTTACG CAGCTGCGCG AAATTCTCGC GGTCGACCCG
AAGCTGCAGG TGCTGGTGAC GCACGGCCTG TTCGACCTCG CCACGCCGTA TTTCGGCAGC
GTCGTCGCCA TCGATCAGTT GCCGCCATTC GCATCGAAGC GGATCAGGCT CGTCACCTGG
CCCGGCGGCC ACATGACCTA CGCCCGCGAC GACGCCCGCA AAGCGCTGCG CGGCGAGGTC
GGGGCGATGA TGAAATAA
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| Protein sequence | MSMSPGFARR VALALILLAT TAALAPARAQ DASPPATAQS KPAPADAEQH KLPADSTTRH
TLALPGRSLS FTATAGSIRL FNDKGEPQAD IATTAYQLDN TEARTRPVTF VFNGGPGASS
AWLQLGAAGP WRLPMAGDAA VASATPALQP NAETWLDVTD LVFIDPVGTG YSRFVASGDD
VRKQFYSVDG DVAAIALVIR RWLEKHDRLL SPKYVAGESY GGIRGPRVVR NLQTRQGIGV
KGLILVSPLL DFREYSGSSL LQYVARLPTM AAAARQRKGP VTRADLADVE SYARGEFITD
LLKGQADQAA TQRLADRVAA SSGIDPAVSR RLAGRLDTSE FQREFDRANG KVTGRFDASV
LGFDPFPDSS DAQFSDPSSE SLIAPLTSAA MELTRNMLQW RPSGSYHLLN GAVSQQWDFG
RGRSPVESVT QLREILAVDP KLQVLVTHGL FDLATPYFGS VVAIDQLPPF ASKRIRLVTW
PGGHMTYARD DARKALRGEV GAMMK
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