Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0439 |
Symbol | |
ID | 3909995 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 482003 |
End bp | 482767 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637882325 |
Product | endonuclease III |
Protein accession | YP_484061 |
Protein GI | 86747565 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0177] Predicted EndoIII-related endonuclease |
TIGRFAM ID | [TIGR01083] endonuclease III |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.45571 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.92859 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGAAAA TCACCCGCCG CGTGGCCGCT CCCGCCGCCC CGAGAACCGC CAAGACTACC CCGAAAAGCC TTGCGGCAAA CCCGGGGCAA ACCGGAGGCA AACCTGCGAA GCCGCCAAAA CGCCCCCGCC GCTGGACTCC AGACGAGGTT CGCGAGGCTT TCACCCGCTT CGCCCGCGCC AACCCGGAGC CGAAGGGTGA GCTCGAACAT CTCAACCCGT TCACCCTGCT GGTCGCGGTC GTGTTGTCGG CGCAGGCGAC CGATGCCGGC GTCAACAAGG CGACTCGGAG TTTGTTCGCG ATCGCCGATA CGCCGGCCAA GATGCTGGCG CTCGGCGAGG AGCGGGTGCG GGAGCATATC AAGACCATCG GCCTGTTTCG CACCAAGGCG AAAAACGTGA TTGCGCTGTC GCAAAAACTG CTCTCCGACT TTGGTGGGCA AGTCCCAAGC ACGCGCGCCG AGCTGGAGAC GTTGCCGGGG GCGGGCCGCA AGACCGCCAA TGTGGTGCTC AACATGGCGT TCGGTCAGCC CACCATGGCG GTCGATACCC ATGTGTTTCG CGTCGGCAAC CGCACCGGGC TCGCGCCCGG CGACACGCCG CTCGCGGTCG AACTCGGGCT CGAGAAGGCG ATCCCGCCGG AGTTCATGCA GCACGCGCAC CATTGGCTGA TCCTGCACGG CCGCTACACC TGCCTGGCCC GCAAGCCGCG CTGCGAGGTC TGCCTGATCG TCGATCTGTG CAGGTGGCCG GAGAAAAGTG TGTAG
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Protein sequence | MSKITRRVAA PAAPRTAKTT PKSLAANPGQ TGGKPAKPPK RPRRWTPDEV REAFTRFARA NPEPKGELEH LNPFTLLVAV VLSAQATDAG VNKATRSLFA IADTPAKMLA LGEERVREHI KTIGLFRTKA KNVIALSQKL LSDFGGQVPS TRAELETLPG AGRKTANVVL NMAFGQPTMA VDTHVFRVGN RTGLAPGDTP LAVELGLEKA IPPEFMQHAH HWLILHGRYT CLARKPRCEV CLIVDLCRWP EKSV
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