| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0438 |
|---|
| Symbol | |
|---|
| ID | 3909994 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 481465 |
|---|
| End bp | 481980 |
|---|
| Gene Length | 516 bp |
|---|
| Protein Length | 171 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637882324 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_484060 |
|---|
| Protein GI | 86747564 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5488] Integral membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.92859 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGACAG ACAGCGATCT TGATCCGGAT CGGGCCGAGC CGAAACTGTT TTCGGCGCTG
CTGACGCCGC ATCGCGCCTT GAGTCACAAG GCTTTTCTGG TGCTGATGGG ATTCCTCGGC
ACGATCAGCT TCGCCGCCGG CCTCGGCTTC TGGATGATCG GCGCCTGGCC GGTGTTCGGC
TTCTTCGGCC TCGATCTGCT GGCGATCTAT ATCGCCTTCA AAGTGGTCTT CGCCCGCGGC
CGCGCCACCG AGGAAATCTC GATGACTCCC AGTGAGTTAC GGGTCCGCCG CACGTCGCCG
CGCGGGCAGG TCGCCGAATG GGTGCTGAAC CCGCTCTGGG TCCGGCTGGA GAAGATCGTG
CATGCCGAGT TCGGCATCGA GCAGCTCTAT CTGGTCTCCT CCGGCCGCCG CGTCAGCGTC
GCGAGCTTTC TCGGCGCGGA AGAAAAAGCG AGCTTCGCCA ACGCTTTGAC AGCAGCCTTG
GAGGCCGCCC GGCGCGGCCC GTCGTATCAA TCCTGA
|
|---|
| Protein sequence | MTTDSDLDPD RAEPKLFSAL LTPHRALSHK AFLVLMGFLG TISFAAGLGF WMIGAWPVFG
FFGLDLLAIY IAFKVVFARG RATEEISMTP SELRVRRTSP RGQVAEWVLN PLWVRLEKIV
HAEFGIEQLY LVSSGRRVSV ASFLGAEEKA SFANALTAAL EAARRGPSYQ S
|
|---|
| |